CURRICULUM VITAE

GENERAL

TANMOY BHATTACHARYA
Scientist 5, Los Alamos National Laboratory and
External Professor, Santa Fe Institute
Santa Fe, NM 87501
United States of America
+1 (505) 946 2704
Date of birth: 5th November, 1962

EDUCATION

1982
B. Sc. in Physics, IIT, Kharagpur, India
1984
M. Sc. in Physics, IIT, Kharagpur, India
1989
Ph. D. in Physics, Tata Institute of Fundamental Research, Bombay, India

EMPLOYMENT

1989–91
Post-doctoral fellow at Brookhaven National Laboratory
1991–92
Post-doctoral fellow at Centre de Energie Atomique, Saclay
9 Nov 1992–7 Nov 1994
Post-doctoral Fellow at Los Alamos National Laboratory
8 Nov 1994–5 Nov 1995
Post-doctoral Research Associate at Los Alamos National Laboratory
6 Nov 1995–31 Jan 1999
Limited Term Staff Member at Los Alamos National Laboratory
1 Feb 1999–27 Jul 2008
Staff Member at Los Alamos National Laboratory
28 Jul 2008–30 Jun 2013
Scientist 4 at Los Alamos National Laboratory
2006–31 Jan 2017
Professor at Santa Fe Institute
31 Jan 2017–
External Professor at Santa Fe Institute
1 Jul 2013–
Scientist 5 at Los Alamos National Laboratory

PUBLICATIONS

This is a roughly reverse time-ordered list of my publications and a few unpublished papers. See my academic interests page for a brief description of the context in which this research sits. I have a LinkedIn profile, but this page is likely to be more complete and updated, and an Academia.edu profile. My ORCID is 0000-0002-1060-652X (QR code on right), Researcher id is J-8956-2013 , and the Scopus Author ID 7006308075 conflates me with a namesake.

The links below from the author names go to their home pages. The ori links go directly to the papers. Note that on-line journals may need subscription. The pmid links go to pub med which provides a detailed metadata for the paper, whereas PMC's and NIHMS's go to the Pubmed Central and the NIH Manuscript Submission system which makes US government funded biomedical work available for free after an embargo period. A list of my papers on the publicly accessible e-print arXiv, which covers my physics interests, can be obtained using my arXiv public identifier bhattacharya_t_1; the arXiv identifiers on the individual entries link to the abstract of the paper on the arXiv allowing retrieval of the full text; it might be more convenient to access one of its mirror sites instead. Though every attempt is made to update them, the versions on the arXiv are not always completely up to date.

The altmetric links, if visible, provide a measure the online impact of the work. The inspire links go to the InSpire HEP database, which allows a citation search in high energy physics. The InSpire publication summary page provides statistics of my career in HEP publication; and my InSpire ID is INSPIRE-00066839.

Citation count

Google scholar automatically maintains a citation count. According to it, on Jun 27, 2014, the six most cited articles of mine had 937, 805, 637, 442, 344, and 317 citations. With 17 more articles with more than 100 citations and yet 16 others with 50 or more citations, overall my articles had garnered 8608 citations by that date, and I had an h index of 44. I had used similar data on Oct 18, 2013 to calculate my h index as 40, h(2) index to be 13, g index to be 86, a index to be 164.175, m index to be 103.5 and r index to be 6567. My ResearchGate profile had a score of 42.08 with 823.55 impact points on Feb 22, 2016. I don't quite understand this site since I find duplicate listings of my papers there and treatment of my non-biology publications used to be distinctly odd.

Since like all automatic programs, it is difficult to know the accuracy of the google scholar results, I have also manually counted the number of citations each publication had on April 13, 2011. The number I quote below is the larger of the result from ISI Web of Knowledge and from the INSPIRE databases, and is an underestimate because these databases have a very uneven coverage of the various fields I work in. Also, comparing them across fields is a bit problematic. Nevertheless, the count stood at two papers with over 300 citations (317 and 395, not counting citations to responses), four more with over 100, 11 further with greater than 50 citations, 15 more with greater than 25 citations. A more robust measure is that I had over 28 (30 to be exact) papers with 28 citations or more, so my h index was 28. Similarly, my g index was 55, my w index was 9, and my E and P indices were 919 and about 677 respectively.

Miscellaneous

My Erdös number is at most 4, Einstein number at most 5, and Wolfgang Pauli and Eugene Wigner numbers at most 4, as detailed here. My academic genealogy is traced here.

In Chinese patent applications, my name is spelt 坦莫伊·巴塔查里亚, and in Japanese as バッタチャルヤ, タンモイ. In Devanagari script it is written as तन्मय भट्टाचार्य and I spell my name in Bengali as তন্ময় ভট্টাচার্য্য.

Papers and refereed conference papers

  1. Axial Vector Form Factors of the Nucleon from Lattice QCD (Rajan Gupta, Yong-Chull Jang, Huey-Wen Lin, Boram Yoon, and Tanmoy Bhattacharya, (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) In preparation.
  2. Transmission of multiple HIV-1 transmitted/founder viruses into the same recipients was not determined by modest phenotypic differences. or Disparate phenotypic properties of multiple transmitted/founder viruses in the same HIV-1-infected individuals (Hongshuo Song, Bhavna Hora, Elena E. Giorgi, Amit Kumar, Fangping Cai, Tanmoy Bhattacharya, Alan Perelson, and Feng Gao) Scientific Reports 6 (2016) 38130; ori:doi:10.1038/srep38130 Published online Dec 02, 2016.
  3. Worldline approach for numerical computation of electromagnetic Casimir energies. I. Scalar field coupled to magnetodielectric media (Jonathan B. Mackory, Tanmoy Bhattacharya and Daniel A. Steck) Los Alamos report LA-UR-16-24039, June 2016. ori:oai:arXiv.org:1606.00150 [quant-ph] Physical Review A944 (2016) 042508; ori:doi:10.1103/PhysRevA.94.042508 Published October 12, 2016. [inspire].
  4. Event-driven non-cooperative games. (David Wolpert, Justin Grana, Tanmoy Bhattacharya, Brendan Tracey and James Bono) Unpublished
    subsumes
    Event-driven non-cooperative games. (David H. Wolpert, Tanmoy Bhattacharya, Russel Bent, Joshua Neil, Alexander Kent and Annarita Giani) Los Alamos report LA-UR-13-22238, Mar 2013. Unpublished
  5. Isovector charges of the nucleon from 2+1-flavor QCD with clover fermions (Boram Yoon, Yong-Chull Jang, Rajan Gupta, Tanmoy Bhattacharya, Jeremy Green, Bálint Joó, Huey-Wen Lin, Kostas Orginos, David Richards, Sergey Syritsyn, and Frank Winter (Nucleon Matrix Element (NME) Collaboration)) Los Alamos report LA-UR-16-20523. ori:oai:arXiv.org:1611.07452 [hep-lat] [inspire].
  6. Controlling Excited-State Contamination in Nucleon Matrix Elements (Boram Yoon, Rajan Gupta, Tanmoy Bhattacharya, Michael Engelhardt, Jeremy Green, Bálint Joó, Huey-Wen Lin, John Negele, Kostas Orginos, Andrew Pochinsky, David Richards, Sergey Syritsyn, and Frank Winter (Nucleon Matrix Element (NME) Collaboration)) Los Alamos report LA-UR-16-20524. ori:oai:arXiv.org:1602.07737 [hep-lat] Physical Review D93:11 (2016) 114506; ori:doi:10.1103/PhysRevD.93.114506 Published June 8, 2016. [inspire].
  7. Axial, Scalar and Tensor Charges of the Nucleon from Lattice QCD (Tanmoy Bhattacharya, Vincenzo Cirigliano, Saul D. Cohen, Rajan Gupta, Huey-Wen Lin, and Boram Yoon) Los Alamos report LA-UR-15-28922. ori:oai:arXiv.org:1606.07049 [hep-lat] Physical Review D94:5 (2016) 054508; ori:doi:10.1103/PhysRevD.94.054508 Published September 19, 2016. [inspire].
  8. Optimal Combination of Broadly Neutralizing Antibodies for Prevention and Treatment of HIV-1 Clade C Infection. (Ksitij Wagh, Tanmoy Bhattacharya, Carolyn Williamson, Alex Robles, Madeleine Bayne, Jetta Garrity, Michael Rist, Cecilia Rademeyer, Hyejin Yoon, Alan Lapedes, Hongmei Gao, Kelli Greene, Mark K. Louder, Rui Kong, Salim Abdool Karim, Dennis R. Burton, Dan H. Barouch, Michael C. Nussenzweig, John R. Mascola, Lynn Morris, David C. Montefiori, Bette Korber, Michael S. Seaman) Public Library of Science Pathogens 12:3 (2016) e1005520; ori:doi:10.1371/journal.ppat.1005520. pmid: 27028935; PMC4814126. Published March 30, 2016.
  9. Neutron Electric Dipole Moment and Tensor Charges from Lattice QCD (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Huey-Wen Lin, and Boram Yoon (PNDME Collaboration)) Los Alamos report LA-UR-15-24210. ori:oai:arXiv.org:1506.04196 [hep-lat] Physical Review Letters 115:21 (2015) 212002; ori:doi:10.1103/PhysRevLett.115.212002 Published November 17, 2015. [inspire].
  10. Single-Genome Sequencing of Hepatitis C Virus in Donor-Recipient Pairs Distinguishes Modes and Models of Virus Transmission and Early Diversification. (Hui Li, Mark B. Stoddard, Shuyi Wang, Elena E. Giorgi, Lily M. Blair, Gerald H. Learn, Beatrice H. Hahn, Harvey J. Alter, Michael P. Busch, Daniel S. Fierer, Ruy M. Ribeiro, Alan S. Perelson, Tanmoy Bhattacharya, and George M. Shaw) Journal of Virology 90:1 (January 2016) 152166. ori:doi:10.1128/JVI.02156-15; pmid: 26468546; PMC4702571. Published ahead of print October 14, 2015.
  11. Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants. (Peter Hraber, Bette Korber, Ksitij Wagh, Elena E. Giorgi, Tanmoy Bhattacharya, S. Gnanakaran, Alan S. Lapedes, Gerald H. Learn, Edward F. Kreider, Yingying Li, George M. Shaw, Beatrice H. Hahn, David C. Montefiori, S. Munir Alam, Mattia Bonsignori, M. Anthony Moody, Hua-Xian Liao, Feng Gao, and Barton F. Haynes) ori:oai:arXiv.org:1508.00463 [q-bio.PE] Viruses 7:10 (2015) 54435475; pmid: 26506369; PMC4632389. ori:doi:10.3390/v7102881 Published October 21, 2015.
  12. Isovector and Isoscalar Tensor Charges of the Nucleon from Lattice QCD (Tanmoy Bhattacharya, Vincenzo Cirigliano, Saul D. Cohen, Rajan Gupta, Anosh Joseph, Huey-Wen Lin, and Boram Yoon (Precision Neutron Decay Matrix Elements (PNDME) Collaboration)) Los Alamos report LA-UR-15-23801. ori:oai:arXiv.org:1506.06411 [hep-lat] Physical Review D92:09 (2015) 094511; ori:doi:10.1103/PhysRevD.92.094511 Published November 10, 2015. [inspire].
  13. Studying Language Evolution in the Age of Big Data (Tanmoy Bhattacharya, Damián E. Blasi, William Croft, Michael Cysouw, Daniel Hruschka, Ian Maddieson, Lydia Müller, Nancy Retzlaff, Eric Smith, Peter F. Stadler, George Starostin, Hyejin Youn) Submitted.
  14. The Emergence of Life as a First Order Phase Transition (Cole Mathis, Tanmoy Bhattacharya, Sara Imari Walker) Los Alamos report LA-UR-15-21595. ori:oai:arXiv.org:1503.02776 [nlin.AO] Astrobiology In review.
  15. Dimension-5 CP-odd operators: QCD mixing and renormalization (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-15-21109. ori:oai:arXiv.org:1502.07325 [hep-ph] Physical Review D92:11 (2015) 114026; ori:doi:10.1103/PhysRevD.92.114026 Published December 23, 2015. [inspire].
  16. A Likelihood Ratio Anomaly Detector for Identifying Within-Perimeter Computer Network Attacks. (Justin Grana, David Wolpert, Joshua Neil, Dongping Xie, Tanmoy Bhattacharya, Russel Bent) Los Alamos report LA-UR-16-22440, Apr 2016. Journal of Network and Computer Applications 66 (May 2016) 166179; ori:doi:10.1016/j.jnca.2016.03.008; Available online Mar 11, 2016.
    subsumes
    HMMs for Optimal Detection of Computer Network Attacks. (Justin Grana, David Wolpert, Joshua Neil, Dongping Xie, Tanmoy Bhattacharya) Los Alamos report LA-UR-14-24747, Jul 2014. Santa Fe working paper 2014-06-022, Jun 26 2014.
  17. Preexisting compensatory amino acids compromise fitness costs of a HIV-1 T cell escape mutations. (Donglai Liu, Tao Zuo, Bhavna Hora, Hongshuo Song, Wei Kong, Xianghui Yu, Nilu Goonetilleke, Tanmoy Bhattacharya, Alan S. Perelson, Barton F. Haynes, Andrew McMichael, and Feng Gao) Los Alamos report LA-UR-14-24449 July 2013. Retrovirology 11:1 (2014) 101; ori:doi:10.1186/s12977-014-0101-0; pmid: 25407514; PMC4264250. Published Nov 19, 2014.
  18. Impact of clade, geography and age of epidemic on HIV-1 neutralization by antibodies (Peter Hraber, Bette T. Korber, Alan S. Lapedes, Robert T. Bailer, Michael S. Seaman, Hongmei Gao, Kelli M. Greene, Francine McCutchan, Carolyn Williamson, Jerome H. Kim, Sodsai Tovanabutra, Beatrice H. Hahn, Ronald Swanstrom, Michael M. Thompson, Feng Gao, Linda Harris, Elena Giorgi, Nicholas Hengartner, Tanmoy Bhattacharya, John R. Mascola, David C. Montefiori) Journal of Virology 88:21 (Nov 2014). 1262312643 ori:doi:10.1128/JVI.01705-14; pmid: 25142591; PMC4248897. Published ahead of print August 20, 2014.
  19. Equation of state in (2+1)-flavor QCD. (A. Bazavov, Tanmoy Bhattacharya, C. DeTar, H.-T. Ding, Steven Gottlieb, Rajan Gupta, P. Hegde, U.M. Heller, F. Karsch, E. Laermann, L. Levkova, Swagato Mukherjee, P. Petreczky, C. Schmidt, C. Schroeder, R.A. Soltz, W. Soeldner, R. Sugar, M. Wagner, and P. Vranas (HotQCD Collaboration)) Los Alamos report LA-UR-14-25672. ori:oai:arXiv.org:1407.6387 [hep-lat] Physical Review D90:09 (2014) 094503; ori:doi:10.1103/PhysRevD.90.094503 Published Nov 4, 2014. [inspire].
  20. The QCD phase transition with physical-mass, chiral quarks. (Tanmoy Bhattacharya, Michael I. Buchoff, Norman H. Christ, H.-T. Ding, Rajan Gupta, Chulwoo Jung, F. Karsch, Zhongjie Lin, R.D. Mawhinney, Greg McGlynn, Swagato Mukherjee, David Murphy, P. Petreczky, Dwight Renfrew, Chris Schroeder, R.A. Soltz, P.M. Vranas, and Hantao Yin (HotQCD Collaboration)) Brookhaven preprint BNL-103837-2014-JA, Columbia University preprint CU-TP-1205, INT preprint INT-PUB-14-003, Los Alamos report LA-UR-14-21066, and Livermore preprint LLNL-JRNL-650194. ori:oai:arXiv.org:1402.5175 [hep-lat] Physical Review Letters 113:08 (2014) 082001; ori:doi:10.1103/PhysRevLett.113.082001 Published Aug 18, 2014. [inspire].
  21. Reversion and T cell escape mutations compensate the fitness loss of a CD8+T cell escape mutant in their cognate transmitted/founder virus. (Hongshuo Song, Bhavna Hora, Tanmoy Bhattacharya, Nilu Goonetilleke, Michael K.P. Liu, Kevin Wiehe, Hui Li, Shilpa S. Iyer, Andrew J. McMichael, Alan S. Perelson, Feng Gao) Public Library of Science One 9:7 (2014) e102734; ori:doi:10.1371/journal.pone.0102734; pmid: 25028937; PMC4100905. Published online Jul 16, 2014.
  22. Automatic Estimation of Transmitted Founder Variants in Acute HIV-1 Infection. In preparation.
  23. Universal replication and the origins of biological diversity. (Sara Imari Walker and Tanmoy Bhattacharya) Los Alamos report LA-UR-13-25377 July 2013. In revision.
  24. Evolutionary dynamics and information hierarchies in biological systems. (Sara Imari Walker, Benjamin J. Callahan, Gaurav Arya, J. David Barry, Tanmoy Bhattacharya, Sergei Grigoryev, Matteo Pellegrini, Karsten Rippe, Susan M. Rosenberg) Annals of the New York Academy of Sciences, 1305:Annals Reports (December 2013) 117; ori:doi:10.1111/nyas.12140; pmid: 23691975. First published online May 20, 2013.
  25. Nucleon Charges and Electromagnetic Form Factors from 2+1+1-Flavor Lattice QCD. (Tanmoy Bhattacharya, Saul D. Cohen, Rajan Gupta, Anosh Joseph, Huey-Wen Lin, and Boram Yoon) Los Alamos report LA-UR-13-24606, University of Washington preprint NT@UW-13-23, ori:oai:arXiv.org:1306.5435 [hep-lat] Physical Review D89:9 (2014) 094502; ori:doi:10.1103/PhysRevD.89.094502 Published May 6, 2014. [inspire].
  26. Detecting regular sound changes in linguistics as an example of concerted evolution. (Daniel J. Hruschka, Simon Branford, Eric D. Smith, Jon Wilkins, Andrew Meade, Mark Pagel, and Tanmoy Bhattacharya) Los Alamos report LA-UR-14-29463, Dec 2014. Current Biology 25:1 (2015) 19; ori:doi:10.1016/j.cub.2014.10.064; pmid: 25532895; PMC4291143 Published online Dec 18, 2014.
  27. Molecular Mechanisms of HIV Type 1 Prophylaxis Failure Revealed by Single-Genome Sequencing. (Hui Li, Lily Blair, Yalu Chen, Gerald Learn, Katja Pfafferott, Mina John, Tanmoy Bhattacharya, Beatrice H Hahn, Simon Mallal, George M Shaw, and Katherine J Bar) The Journal of Infectious Diseases 208:10 (2013) 15981603; ori:doi:10.1093/infdis/jit485; pmid: 24023257. PMC3805246; Published online Sep 9, 2013.
  28. Human APOBEC3 Induced Mutation of Human Immunodeficiency Virus Type-1 Contributes to Adaptation and Evolution in Natural Infection. (Eun-Young Kim, Ramon Lorenzo-Redondo, Susan J. Little, Yoon-Seok Chung, Prabhjeet K. Phalora, Irina Maliijkovic Berry, John P. Archer, Sudhir Penugonda, Will Fischer, Douglas D. Richman, Tanmoy Bhattacharya, Michael H. Malim, and Steven M. Wolinsky) Los Alamos report LA-UR-14-25673 Public Library of Science Pathogens 10:7 (2014) e1004281; ori:doi:10.1371/journal.ppat.1004281. pmid:25080100; PMC4117599 Published online Jul 31, 2014.
  29. Modeling sequence evolution in HIV-1 infection with recombination. (Elena E. Giorgi, Bette T. Korber, Alan S. Perelson, and Tanmoy Bhattacharya), Los Alamos report LA-UR-12-24298, Sep 2012. Journal of Theoretical Biology 329 (21 July 2013) 8293; ori:doi:10.1016/j.jtbi.2013.03.026; pmid: 23567647; PMC3667750; NIHMS465784. Published online Apr 6, 2013.
  30. Quantifying the Diversification of Hepatitis C Virus (HCV) During Primary Infection: Estimates of the In Vivo Mutation Rate. (Ruy M. Ribeiro, Hui Li, Shuyi Wang, Mark B. Stoddard, Gerald H. Learn, Bette T. Korber, Tanmoy Bhattacharya, Jeremie Guedj, Erica H. Parrish, Beatrice H. Hahn, George M. Shaw, and Alan S. Perelson), Los Alamos report LA-UR-12-20157, 22 Mar 2012. Public Library of Science Pathogens 8:8 (2012) e1002881; ori:doi:10.1371/journal.ppat.1002881; pmid: 22927817; PMC3426522. Published online Aug 23, 2012.
  31. Computationally-Identified Mutations Suspected to Cause gp120 Charge Inversion and gp41-Mediated Allosteric Effects Impact HIV-1 Susceptibility to Neutralization. (Anthony R. Geonnotti, S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Bette Korber, and David C. Montefiori), In revision for JVI.
  32. Elucidation of Hepatitis C Virus Transmission and Early Diversification by Single Genome Sequencing. (Hui Li, Mark B. Stoddard, Shuyi Wang, Lily M. Blair, Elena E. Giorgi, Erica H. Parrish, Gerald H. Learn, Peter Hraber, Paul A. Goepfert, Michael S. Saag, Thomas N. Denny, Barton F. Haynes, Beatrice H. Hahn, Ruy M. Ribeiro, Alan S. Perelson, Bette T. Korber, Tanmoy Bhattacharya, and George M. Shaw), Los Alamos report LA-UR-12-20288, Mar 2012. Public Library of Science Pathogens 8:8 (2012) e1002880; ori:doi:10.1371/journal.ppat.1002880; pmid: 22927816; PMC3426529. Published online Aug 23, 2012.
  33. Impact of immune escape mutations on HIV-1 fitness in the context of the cognate transmitted/founder genome. (Hongshuo Song, Jeffrey W. Pavlichek, Fangping Cai, Tanmoy Bhattacharya, Hui Li, Shilpa S. Iyer, Katharine J. Bar, Julie M. Decker, Nilu Goonetilleke, Michael K.P. Liu, Anna Berg, Bhavna Hora, Mark S. Drinker, Josh Eudailey, Joy Pickeral, M. Anthony Moody, Guido Ferrari, Andrew McMichael, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Barton F. Haynes, and Feng Gao), Retrovirology 9:10 (2012) 89; ori:doi:10.1186/1742-4690-9-89; pmid: 23110705; PMC3496648. Published online Oct 30, 2012.
  34. On the universal structure of human lexical semantics. (Hyejin Youn, Logan Sutton, Eric Smith, Cristopher Moore, Jon Wilkins, Ian Maddieson, William Croft, and Tanmoy Bhattacharya) Los Alamos report LA-UR-15-23327, May 2015. Santa Fe working paper 2015-04-013, Apr 29 2015. ori:oai:arXiv.org:1504.07843 [physics.soc-ph] Proceedings of the National Academy of Sciences 113:7 (2016) 17661771; Published ahead of print February 1, 2016. ori:doi:10.1073/pnas.1520752113; pmid: 26831113; PMC4763760.
  35. Chiral transition and U(1)A symmetry restoration from lattice QCD using Domain Wall Fermions. (A. Bazavov, Tanmoy Bhattacharya, Michael I. Buchoff, Michael Cheng, N.H. Christ, H.-T. Ding, Rajan Gupta, Prasad Hegde, Chulwoo Jung, F. Karsch, Zhongjie Lin, R.D. Mawhinney, Swagato Mukherjee, P. Petreczky, R.A. Soltz, P.M. Vranas, and Hantao Yin (HotQCD Collaboration)) Columbia University preprint CU-TP-1200, Brookhaven preprint BNL-97301-2012-JA, Los Alamos report LA-UR-12-21329, Livermore preprint LLNL-JRNL-557574. ori:oai:arXiv.org:1205.3535 [hep-lat] Physical Review D86:9 (2012) 094503; ori:doi:10.1103/PhysRevD.86.094503 Published Nov 6, 2012. [inspire].
  36. Fluctuations and Correlations of net baryon number, electric charge, and strangeness: A comparison of lattice QCD results with the hadron resonance gas model. (A. Bazavov, Tanmoy Bhattacharya, C.E. DeTar, H.-T. Ding, Steven Gottlieb, Rajan Gupta, P. Hegde, Urs M. Heller, F. Karsch, E. Laermann, L. Levkova, Swagato Mukherjee, P. Petreczky, Christian Schmidt, R.A. Soltz, W. Soeldner, R. Sugar, and Pavlos M. Vranas (HotQCD Collaboration)) ori:oai:arXiv.org:1203.0784 [hep-lat] Physical Review D86:3 (2012) 034509; ori:doi:10.1103/PhysRevD.86.034509 Published Aug 31, 2012 [inspire].
  37. Probing Novel Scalar and Tensor Interactions from (Ultra)Cold Neutrons to the LHC. (Tanmoy Bhattacharya, Vincenzo Cirigliano, Saul D. Cohen, Alberto Filipuzzi, Martín González-Alonso, Michael L. Graesser, Rajan Gupta, Huey-Wen Lin) Los Alamos report LA-UR-11-11460, Septemper 2011. University of Washington preprint NT@UW-11-16, Universitat de València preprint IFIC/11-57 and FTUV/11-1007, University of Wisconsin-Madison preprint NPAC-11-14, ori:oai:arXiv.org:1110.6448 [hep-ph] Physical Review D85:5 (2012) 054512; ori:doi:10.1103/PhysRevD.85.054512. Published Mar 30, 2012. [inspire].
  38. Chiral and deconfinement aspects of the QCD transition (A. Bazavov, T. Bhattacharya, M. Cheng, C. DeTar, H.-T. Ding, Steven Gottlieb, R. Gupta, P. Hegde, U.M. Heller, F. Karsch, E. Laermann, L. Levkova, S. Mukherjee, P. Petreczky, C. Schmidt, R.A. Soltz, W. Soeldner, R. Sugar, D. Toussaint, W. Unger, and P. Vranas (HotQCD Collaboration)) BNL report BNL-96539-2011-JA, LANL report LA-UR-11928. ori:oai:arXiv.org:1111.1710 [hep-lat] Physical Review D85:5 (2012) 054503; ori:doi:10.1103/PhysRevD.85.054503. Published Mar 5, 2012. [inspire].
  39. Greenbergian universals, diachrony and statistical analysis (William Croft, Tanmoy Bhattacharya, Dave Kleinschmidt, D. Eric Smith, T. Florian Jaeger), Los Alamos report LA-UR-11-03658, June 2011. Linguistic Typology 15:2 (2011) 433453 ori:doi:10.1515/LITY.2011.029. Published online Nov 22, 2011.
  40. Geographical distribution of phonological complexity (Ian Maddieson, Tanmoy Bhattacharya, Eric Smith, William Croft), Los Alamos report LA-UR-11-03659, June 2011. Linguistic Typology 15:2 (2011) 267269 ori:doi:10.1515/LITY.2011.020. Published online Nov 22, 2011.
  41. A Note on Two-sample Tests for Comparing Intra-individual Genetic Sequence Diversity between Populations (EE Giorgi and T Bhattacharya) Los Alamos report LA-UR-11-10065. Biometrics 68:4 (2012) 13231326 ori:doi:10.1111/j.1541-0420.2012.01775.x; pmid: 23004569; PMC3652673; NIHMS454001. Published online Sep 24, 2012.
  42. Role of Donor Genital Tract HIV-1 Diversity in the Transmission Bottleneck (Debrah I. Boeras, Peter T. Hraber, Mackenzie Hurlston, Tammy Evans-Strickfaden, Tanmoy Bhattacharya, Elena E. Giorgi, Joseph Mulenga, Etienne Karita, Bette T. Korber, Susan Allen, Clyde E. Hart, Cynthia A. Derdeyn and Eric Hunter) Los Alamos report LA-UR-11-11256. Proceedings of the National Academy of Sciences 108:46 (2011) E1156E1163 ori:doi:10.1073/pnas.1103764108; pmid: 22065783; PMC3219102. Published online Nov 7, 2011.
  43. Recurrent Signature Patterns in HIV-1 B Clade Envelope Glycoproteins Associated with either Early or Chronic Infection (S. Gnanakaran, Tanmoy Bhattacharya, Marcus Daniels, Brandon F. Keele, Peter T. Hraber, Alan S. Lapedes, Tongye Shen, Brian Gaschen, Mohan Krishnamoorthy, Hui Li, Julie M. Decker, Jesus F. Salazar-Gonzalez, Shuyi Wang, Chunlai Jiang, Feng Gao, Ronald Swanstrom, Jeffrey A. Anderson, Li-Hua Ping, Myron S. Cohen, Martin Markowitz, Paul A. Goepfert, Michael S. Saag, Joseph J. Eron, Charles B. Hicks, William A. Blattner, Georgia D. Tomaras, Mohammed Ashmal, Norman L. Letvin, Peter B. Gilbert, Allan C. DeCamp, Craig A. Magaret, William R. Schief, Yih-En Andrew Ban, Ming Zhang, Kelly A. Soderberg, Joseph G. Sodorsky, Barton F. Haynes, George M. Shaw, Beatrice H. Hahn and Bette Korber) Public Library of Science Pathogens 7:9 (2011) e1002209 ori:doi:10.1371/journal.ppat.1002209; pmid: 21980282; PMC3182927. Published online September 29, 2011.
  44. A Signature in HIV-1 Envelope Leader Peptide Associated with Transition from Acute to Chronic Infection Impacts Envelope Processing and Infectivity (Mohammed Asmal, Ina Hellmann, Weimin Liu, Brandon F. Keele, Alan S. Perelson, Tanmoy Bhattacharya, S. Gnanakaran, Marcus Daniels, Barton F. Haynes, Bette T. Korber, Beatrice H. Hahn, George M. Shaw and Norman L. Letvin) Public Library of Science One 6:8 (2011) e23673 ori:doi:10.1371/journal.pone.0023673; pmid: 21876761; PMC3158090. Published online August 18, 2011.
  45. Epitope-specific CD8+ T Lymphocytes Cross-recognize Mutant SIV Sequences but Fail to Contain Very Early Evolution and Eventual Fixation of Epitope Escape Mutations During SIV Infection. (Evan M. Cale, Peter Hraber, Elena E. Giorgi, Will Fisher, Tanmoy Bhattacharya, Thomas Leitner, Wendy W. Yeh, Cheryl Gleasner, Lance D. Green, Cliff S. Han, Bette Korber, and Norman L. Letvin) Journal of Virology 85:8 (2011) 37463757. ori:doi:10.1128/JVI.02420-10; pmid: 21307185; PMC3126128. Published ahead of print February 9, 2011.
  46. Genital tract sequestration of SIV following acute infection (James B. Whitney, Peter T. Hraber, Corinne Luedemann, Elena E. Giorgi, Marcus G. Daniels, Tanmoy Bhattacharya, Srinivas S. Rao, John R. Mascola, Gary J. Nabel, Bette T. Korber, and Norman L. Letvin) Public Library of Science Pathogens 7:2 (2011) e1001293 ori:doi:10.1371/journal.ppat.1001293; pmid: 21379569; PMC3040679. Published online February 17, 2011.
  47. Absence of Xenotropic Murine Leukemia Virus-Related Virus in Blood Cells of Men at Risk for and Infected with HIV (Kevin J. Kunstman, Tanmoy Bhattacharya, John Flaherty, John P. Phair, and Steven M. Wolinsky) Los Alamos report LA-UR-09-08117, December 2009. AIDS 24:11 (July 17, 2010) 17841785 ori:doi:10.1097/QAD.0b013e32833b76fb; pmid: 20597166. 2 citations as of Apr 13, 2011.
  48. Transmission of Single HIV-1 and Dynamics of Early Immune Escape Revealed by Ultra-deep Sequencing (Will Fischer, Vitaly V. Ganusov, Elena E. Giorgi, Peter T. Hraber, Brandon F. Keele, Thomas Leitner, Cliff S. Han, Cheryl D. Gleasner, Lance Green, Chien-Chi Lo, Ambarish Nag, Timothy C. Wallstrom, Shuyi Wang, Andrew J. McMichael, Barton F. Haynes, Beatrice H. Hahn, Alan S. Perelson, Persephone Borrow, George M. Shaw, Tanmoy Bhattacharya, and Bette Korber) Public Library of Science One 5:8 (2010) e12303 ori:doi:10.1371/journal.pone.0012303; pmid: 20808830; PMC2924888. Published online August 20, 2010. 3 citations as of Apr 13, 2011.
  49. High Multiplicity Infection by HIV-1 in Men Who Have Sex with Men (Hui Li, Katharine J. Bar, Shuyi Wang, Julie M. Decker, Yalu Chen, Chuanxi Sun, Jesus F. Salazar-Gonzalez, Maria G. Salazar, Gerald H. Learn, Charity J. Morgan, Joseph E. Schumacher, Peter Hraber, Elena E. Giorgi, Tanmoy Bhattacharya, Bette T. Korber, Alan S. Perelson, Joseph J. Eron, Myron S. Cohen, Charles B. Hicks, Barton F. Haynes, Martin Markowitz, Brandon F. Keele, Beatrice H. Hahn, and George M. Shaw) Public Library of Science Pathogens 6:5 (2010) e1000890. ori:doi:10.1371/journal.ppat.1000890; pmid: 20485520; PMC2869329. Published online May 13, 2010 8 citations as of Apr 13, 2011.
  50. Genetic signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies. (S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Anurag Sethi, Ming Li, Haili Tang, Kelli Greene, Hongmei Gao, Barton F. Haynes, Myron S. Cohen, George M. Shaw, Michael Seaman, Amit Kumar, Feng Gao, David C. Montefiori, and Bette Korber) Public Library of Science Computational Biology 6:10 (2010) e1000955 ori:doi:10.1371/journal.pcbi.1000955; pmid: 20949103; PMC2951345. Published online October 7, 2010. 1 citation as of Apr 13, 2011.
  51. Estimating time since infection in Early Homogeneous HIV-1 Samples using a Poisson Model (Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya, Alan S. Perelson, Bette Korber, and Tanmoy Bhattacharya) Biomedcentral Bioinformatics 11 (2010) 532 ori:doi:10.1186/1471-2105-11-532; pmid: 20973976; PMC2975664. Published online October 25, 2010. 1 citation as of Apr 13, 2011.
  52. Tiered Categorization of a Diverse Panel of HIV-1 Env Pseudoviruses for Neutralizing Antibody Assessment (Michael S. Seaman, Holly Janes, Natalie Hawkins, Lauren E. Grandpre, Colleen Devoy, Ayush Giri, Rory T. Coffey, Linda Harris, Blake Wood, Marcus G. Daniels, Tanmoy Bhattacharya, Alan Lapedes, Victoria R. Polonis, Francine E. McCutchan, Peter B. Gilbert, Steve G. Self, Bette T. Korber, David C. Montefiori, and John R. Mascola) Journal of Virology 84:3 (2010) 14391452 ori:doi:10.1128/JVI.02108-09; pmid: 19939925; PMC2812321. Published online November 25, 2009. 14 citations as of Apr 13, 2011.
  53. Breadth of HIV-specific Neutralizing Activity in Sera: Clustering Analysis and Association with Clinical Variables (Nicole A. Doria-Rose, Rachel M. Klein, Marcus G. Daniels, Sijy O'Dell, Martha Nason, Alan Lapedes, Tanmoy Bhattacharya, Stephen A. Migueles, Richard T. Wyatt, Bette T. Korber, John R. Mascola, and Mark Connors), Journal of Virology 84:3 (2010) 16311636 ori:doi:10.1128/JVI.01482-09; pmid: 19923174; PMC2812355. Published online November 18, 2009. . 12 citations as of Apr 13, 2011
  54. Equation of state and QCD transition at finite temperature (A. Bazavov, T. Bhattacharya, M. Cheng, N.H. Christ, C. DeTar, S. Ejiri, Steven Gottlieb, R. Gupta, U.M. Heller, K. Huebner, C. Jung, F. Karsch, E. Laermann, L. Levkova, C. Miao, R.D. Mawhinney, P. Petreczky, C. Schmidt, R.A. Soltz, W. Soeldner, R. Sugar, D. Toussaint, P. Vranas) ori:oai:arXiv.org:0903.4379 [hep-lat] Physical Review D80:1 (2009) 014504; ori:doi:10.1103/PhysRevD.80.014504. Published Jul 17, 2009. [inspire]. 193 citations as of Apr 13, 2011.
  55. The First T Cell Response to Transmitted/Founder Virus Contributes to the Control of Acute Viremia in HIV-1 Infection (Nilu Goonetilleke, Michael K.P. Liu, Jesus F. Salazar-Gonzalez, Guido Ferrari, Elena Giorgi, Vitaly V. Ganusov, Brandon F. Keele, Gerald H. Learn, Emma L. Turnbull, Maria G. Salazar, Kent J. Weinhold, Stephen Moore, CHAVI Clinical Core B, Norman Letvin, Barton F. Haynes, Myron S. Cohen, Peter Hraber, Tanmoy Bhattacharya, Persephone Borrow, Alan S. Perelson, Beatrice H. Hahn, George M. Shaw, Bette T. Korber and Andrew J. McMichael) Journal of Experimental Medicine 206:6 (2009) 12531272 ori:doi:10.1084/jem.20090365; pmid: 19487423; PMC2715063. Published online June 1, 2009. 66 citations as of Apr 13, 2011.
  56. Low-dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1 (Brandon F. Keele, Hui Li, Gerald H. Learn, Peter Hraber, Elena E. Giorgi, Truman Grayson, Chuanxi Sun, Yalu Chen, Wendy W. Yeh, Norman L. Letvin, John R. Mascola, Gary J. Nabel, Barton F. Haynes, Tanmoy Bhattacharya, Alan S. Perelson, Bette T. Korber, Beatrice H. Hahn and George M. Shaw) Los Alamos report LA-UR-08-08081, December 2008. Journal of Experimental Medicine 206:5 (2009) 11171134. ori:doi:10.1084/jem.20082831; pmid: 19414559; PMC2715022. Published online May 4, 2009. 39 citations as of Apr 13, 2011.
  57. The HLA-B/-C Haplotype Block Contains Major Determinants for Host Control of HIV (Elizabeth Trachtenberg, Tanmoy Bhattacharya, Martha Ladner, John Phair, Henry Erlich and Steven M. Wolinsky) Los Alamos report LA-UR 08-07875, December 2008. Genes and Immunity 10:8 (2009) 673677; ori:doi:10.1038/gene.2009.58; pmid: 19693088; PMC2873233; NIHMS201076. Published online August 20, 2009. 4 citations as of Apr 13, 2011.
  58. Human APOBEC3G-mediated Editing can Promote HIV-1 Sequence Diversification and Accelerate Adaptation to Selective Pressure. (Eun-Young Kim, Tanmoy Bhattacharya, Kevin Kunstman, Peter Swantek, Fransje A. Koning, Michael H. Malim and Steven M. Wolinsky) Los Alamos report LA-UR 08-07876, December 2008. Journal of Virology 84:19 (2010) 1040210405. ori:doi:10.1128/JVI.01223-10; pmid: 20660203; PMC2937764. Published ahead of print July 21, 2010 1 citation as of Apr 13, 2011.
  59. CCL3L1 and HIV/AIDS susceptibility (Tanmoy Bhattacharya, Jennifer Stanton, Eun-Young Kim, Kevin J. Kunstman, John P. Phair, Lisa P. Jacobson and Steven M. Wolinsky) Los Alamos report LA-UR-08-07711, December 2008. Nature Medicine 15:10 (October 2009) 11121115 ori:doi:10.1038/nm1009-1112; pmid: 19812561. Corrected online Nov 3, 2009. 11 citations as of Apr 13, 2011.
  60. Detecting Recombination within Highly Similar Sequences In preparation.
  61. HIV Evolution in Early Infection: Selection Pressures, Patterns of Insertions and Deletions and the impact of Apobec (Natasha Wood, Tanmoy Bhattacharya, Brandon F. Keele, Elena Giorgi, Michael Liu, Brian Gaschen, Marcus Daniels, Guido Ferrari, Barton F. Haynes, Andrew McMichael, George M. Shaw, Beatrice H. Hahn, Bette Korber and Cathal Seoighe) Los Alamos report LA-UR-08-00653, February 2008. Public Library of Science Pathogens 5:5 (2009) e1000414. ori:doi:10.1371/journal.ppat.1000414; pmid: 19424423; PMC2671846. Published online May 8, 2009 13 citations as of Apr 13, 2011.
  62. Highly Complex Neutralization Determinants on a Monophyletic Lineage of Newly Transmitted Subtype C Human Immunodeficiency Virus Type 1 Env Clones from India (Smita S. Kulkarni, Alan Lapedes, Haili Tang, S. Gnanakaran, Marcus G. Daniels, Ming Zhang, Tanmoy Bhattacharya, Ming Li, Victoria R. Polonis, Francine E. McCutchan, Lynn Morris, Dennis Ellenberger, Salvatore T. Butera, Robert C. Bollinger, Bette T. Korber, Ramesh S. Paranjape, and David Charles Montefiori) Los Alamos report LA-UR-07-08163, December 2007. Virology 385:2 (2009) 505520 ori:doi:10.1016/j.virol.2008.12.032; pmid: 19167740; PMC2677301; NIHMS103344. Published ahead of print January 23, 2009 18 citations as of Apr 13, 2011.
  63. Modeling Sequence Evolution in Acute HIV-1 Infection (Ha Youn Lee, Elena E. Giorgi, Brandon F. Keele, Brian K. Gaschen, Gayathri S. Athreya, Jesus F. Salazar-Gonzalez, Kimmy T. Pham, Paul A. Geopfert, J. Michael Kilby, Michael S. Saag, Eric L. Delwart, Michael P. Busch, Beatrice H. Hahn, George M. Shaw, Bette T. Korber, Tanmoy Bhattacharya and Alan S. Perelson) Los Alamos report LA-UR-08-03733, June 2008. Journal of Theoretical Biology 261:2 (2009) 341360. ori:doi:10.1016/j.jtbi.2009.07.038; pmid: 19660475; PMC2760689; NIHMS142119. Available online August 4, 2009 (Corrigendum: Journal of Theoretical Biology 297:3 (2012) 187. ori:doi:10.1016/j.jtbi.2011.12.010. Available online December 22, 2011 ) 12 citations as of Apr 13, 2011.
  64. Quantitating the multiplicity of infection with HIV subtype C reveals a non-Poisson distribution of variants (M-R Abrahams, JA Anderson, EE Giorgi, C Seoighe, K Milsana, L-H Ping, GS Athreya, FK Treurnicht, BF Keele, N Wood, JF Gonzalez-Salazar, T Bhattacharya, H Chu, I Hoffman, S Galvin, C Mapanje, P Kazembe, R Thebus, S Fiscus, W Hide, MS Cohen, S Abdool Karim, BF Haynes, GM Shaw, BH Hahn, BT Korber, R Swanstrom, C Williamson, for the CAPRISA Acute Infection Study Team and the Center for HIV-AIDS Vaccine Immunology Consortium) Los Alamos report LA-UR-08-06483, October 2008. Journal of Virology 83:8 (2009) 35563567. ori:doi:10.1128/JVI.02132-08; pmid: 19193811; PMC2663249. Published ahead of print February 4, 2009 (Corrigendum: Journal of Virology 83:13 (2009) 69746974. ori:doi:10.1128/JVI.00832-09 ) 33 citations as of Apr 13, 2011.
  65. Genetic Identity, Biological Phenotype, and Evolutionary Pathways of Transmitted/Founder Viruses in Acute and Early HIV-1 Infection (Jesus F. Salazar-Gonzalez, Maria G. Salazar, Brandon F. Keele, Gerald H. Learn, Elena E. Giorgi, Hui Li, Julie M. Decker, Shuyi Wang, Joshua Baalwa, Matthias H. Kraus, Nicholas F. Parrish, Katharina S. Shaw, M. Brad Guffey, Katharine J. Bar, Katie L. Davis, Christina Ochsenbauer-Jambor, John C. Kappes, Michael S. Saag, Myron S. Cohen, Joesph Mulenga, Cynthia A. Derdeyn, Susan Allen, Eric Hunter, Martin Markowitz, Peter Hraber, Alan S. Perelson, Tanmoy Bhattacharya, Barton F. Haynes, Bette T. Korber, Beatrice H. Hahn, and George M. Shaw) Journal of Experimental Medicine 206:6 (2009) 12731289 ori:doi:10.1084/jem.20090378; pmid: 19487424; PMC2715054. Published online June 1, 2009. 73 citations as of Apr 13, 2011.
  66. Identification and the Characterization of Transmitted and Early Founder Virus Envelopes in Primary HIV-1 Infection (Brandon F. Keele, Elena E. Giorgi, Jesus Salazar-Gonzalez, Julie M. Decker, Kimmy T. Pham, Maria G. Salazar, Chuanxi Sun, Truman Grayson, Shuyi Wang, Hui Li, Xiping Wei, Chunlai Jiang, Jennifer L. Kirchherr, Feng Gao, Jeffrey A. Anderson, Li-Hua Ping, Ronald Swanstrom, Georgia D. Tomaras, William A. Blattner, Paul A. Goepfert, J. Michael Kilby, Michael S. Saag, Eric L. Delwart, Michael P. Busch, Myron S. Cohen, David C. Montefiori, Barton F. Haynes, Brian Gaschen, Gayathri S. Athreya, Ha Y. Lee, Natasha Wood, Cathal Seoighe, Alan S. Perelson, Tanmoy Bhattacharya, Bette T. Korber, Beatrice H. Hahn, George M. Shaw) Los Alamos report LA-UR-07-07974, November 2007. Proceedings of the National Academy of Sciences 105:21 (2008) 75527557 ori:doi:10.1073/pnas.0802203105; pmid: 18490657; PMC2387184. Published online May 19, 2008. 195 citations as of Apr 13, 2011.
  67. Maternal and paternal imprinted genes oppositely influence risk-based decision making (Claire L. Dent, Trevor Humby, Antonius Plagge, Tanmoy Bhattacharya, Andrew Ward, Lawrence S. Wilkinson Jon F. Wilkins, and Anthony R. Isles) Los Alamos report LA-UR-06-6156, September 2006. Unpublished.
  68. Web-based design and evaluation of T-cell vaccine candidates (James Thurmond, Hyejin Yoon, Carla Kuiken, Karina Yusim, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Bette Korber, and Will Fischer). Los Alamos report LA-UR-07-08354, December 2007. Bioinformatics 24:14 (2008) 16391640 ori:doi:10.1093/bioinformatics/btn251; pmid: 18515277. Published online May 29, 2008 8 citations as of Apr 13, 2011.
  69. HLA Class-I Driven Evolution of Human Immunodeficiency Virus Type 1 Subtype C Proteome: Immune Escape and Viral Load (Christine M. Rousseau, Marcus G. Daniels, Jonathan M. Carlson, Carl Kadie, Hayley Crawford, Andrew Prendergast, Philippa Matthews, Rebecca Payne, Morgane Rolland, Dana N. Raugi, Brandon S. Maust, Gerald H. Learn, David C. Nickle, Hoosen Coovadia, Thumbi Ndung'u, Nicole Frahm, Christian Brander, Bruce D. Walker, Philip J. R. Goulder, Tanmoy Bhattacharya, David E. Heckerman, Bette T. Korber, and James I. Mullins) Journal of Virology 82:13 (2008) 64346446. ori:doi:10.1128/JVI.02455-07; pmid: 18434400; PMC2447109. Published ahead of print April 23, 2008 45 citations as of Apr 13, 2011.
  70. Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1 (Zabrina L. Brumme, Chanson J. Brumme, David Heckerman, Bette T. Korber, Marcus Daniels, Jonathan Carlson, Carl Kadie, Tanmoy Bhattacharya, Celia Chui, James Szinger, Theresa Mo, Robert S. Hogg, Julio S.G. Montaner, Nicole Frahm, Christian Brander, Bruce D. Walker, and P. Richard Harrigan), Los Alamos report LA-UR-07-0410, January 2007. Los Alamos report LA-UR-07-0410, Jan 2007. Public Library of Science Pathogens 3:7 (2007) e94. ori:doi:10.1371/journal.ppat.0030094; pmid: 17616974; PMC1904471. Published online July 6, 2007. (Affiliation correction ibid. 3:8 (2007) e121. ori:doi:10.1371/journal.ppat.0030121. Published online August 31, 2007.) 60 citations as of Apr 13, 2011.
  71. Extensive Intra-subtype Recombination in South African Human Immunodeficiency Virus Type 1 Subtype C Infections (Christine M. Rousseau, Gerald H. Learn, Tanmoy Bhattacharya, David C. Nickle, David Heckerman, Senica Chetty, Christian Brander, Philip J.R. Goulder, Bruce D. Walker, Photini Kiepiela, Bette T. Korber, and James I. Mullins), Los Alamos report LA-UR-06-6156, September 2006. Journal of Virology 81:9 (2007) 44924500. ori:doi:10.1128/JVI.02050-06; pmid: 17314156; PMC1900147. Published ahead of print February 21, 2007 20 citations as of Apr 13, 2011.
  72. Clade Specific Differences between Human Immunodeficiency Virus Type 1 Clades B and C: Diversity and Correlations in C3–V4 Regions of gp120 (S. Gnanakaran, Dorothy Lang, Marcus Daniels, Tanmoy Bhattacharya, Cynthia Derdyn, and Bette Korber), Los Alamos report LA-UR-06-1255. Journal of Virology 81:9 (2007) 48864891. ori:doi:10.1128/JVI.01954-06; pmid: 17166900; PMC1900169. Published ahead of print December 13, 2006 24 citations as of Apr 13, 2011.
  73. Chiral Lattice Gauge theories from Warped Domain Walls and Ginsparg-Wilson Fermions (Tanmoy Bhattacharya, Matthew R. Martin, and Erich Poppitz), Los Alamos report LA-UR-06-2667, April 2006. ori:oai:arXiv.org:hep-lat/0605003 Physical Review D74:8 (2006) 085028; ori:doi:10.1103/PhysRevD.74.085028. Published Oct 30, 2006. [inspire]. 11 citations as of Apr 13, 2011.
  74. Human Leukocyte Antigen-Associated Sequence Polymorphisms in Hepatitis C Virus Reveal Reproducible Immune Responses and Constraints on Viral Evolution (Joerg Timm, Bin Li, Marcus G. Daniels, Tanmoy Bhattacharya, Laura L. Reyor, Rachel Allgaier, Thomas Kuntzen, Will Fischer, Brian E. Nolan, Jared Duncan, Julian Schulze zur Wiesch, Arthur Y. Kim, Nicole Frahm, Christian Brander, Raymond T. Chung, George M. Lauer, Bette T. Korber, and Todd M. Allen), Los Alamos report LA-UR-06-8196, November 2006. Hepatology, 46:2 (2007) 339349 ori:doi:10.1002/hep.21702; pmid: 17559151. Published online June 8, 2007 34 citations as of Apr 13, 2011.
  75. Founder effects in the assessment of HIV polymorphisms and HLA allele associations or Founder effects contribute to perceived associations between HIV sequence polymorphisms and HLA class I alleles (Tanmoy Bhattacharya, Marcus Daniels, David Heckerman, Brian Foley, Nicole Frahm, Carl Kadie, Jonathan Carlson, Karina Yusim, Ben McMahon, Brian Gaschen, Simon Mallal, James I. Mullins, David C. Nickle, Joshua Herbeck, Christine Rousseau, Gerald H. Learn, Toshiyuki Miura, Christian Brander, and Bruce Walker, and Bette Korber) Los Alamos report LA-UR-06-3312, May 2006. Science 315:5818 (2007) 15831586 ori:doi:10.1126/science.1131528; pmid: 17363674.
    Subsumes
    Multiple factors impact negative associations between HIV sequence polymorphisms and HLA class I alleles Los Alamos report LA-UR-05-3897, May 2005. 93 citations as of Apr 13, 2011.
  76. Polyvalent HIV-1 vaccines for optimal coverage of potential T-cell epitopes in diverse global variants (Will Fischer, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Karina Yusim, Robert Funkhouser, Carla Kuiken, Barton Haynes, Norman L. Letvin, Bruce D. Walker, Beatrice H. Hahn, and Bette T. Korber) Los Alamos report LA-UR-06-3608, May 2006. Nature Medicine 13:1 (2007) 100106 ori:doi:10.1038/nm1461; pmid: 17187074. 72 citations as of Apr 13, 2011.
  77. Warped Domain Wall Fermions (Tanmoy Bhattacharya, Csaba Csáki, Matthew R. Martin, Yuri Shirman, and John Terning), Los Alamos report LA-UR-05-1569, March 2005. ori:oai:arXiv.org:hep-lat/0503011 Journal of High Energy Physics JHEP08 (2005) 061; ori:doi:10.1088/1126-6708/2005/08/061. [inspire]. 9 citations as of Apr 13, 2011.
  78. BK from quenched QCD with improved staggered fermions. or Testing improved staggered fermions with ms and BK. (Weonjong Lee, Tanmoy Bhattacharya, George T. Fleming, Rajan Gupta, Gregory Kilcup, and Stephen Sharpe), Los Alamos report LA-UR-04-4788 , University of Washington report UW-PT 04-11, and Seoul National University report SNUTP-04-008, July 2004. ori:oai:arXiv.org:hep-lat/0409047 Physical Review D71:09 (2005) 094501; ori:doi:10.1103/PhysRevD.71.094501. Published May 2, 2005. [inspire]. 21 citations as of Apr 13, 2011.
  79. Feedback cooling of atomic motion in cavity QED. (Tanmoy Bhattacharya, Salman Habib, Kurt Jacobs, Hideo Mabuchi, and Daniel A. Steck) Los Alamos report LA-UR-04-4687, July 2004. ori:oai:arXiv.org:quant-ph/0509039 Physical Review A74:1 (2006) 012322; ori:doi:10.1103/PhysRevA.74.012322. Published Jul 31, 2006. 16 citations as of Apr 13, 2011.
  80. Successive dominance of human immunodeficiency virus type 1 sequences in patients receiving combination antiretroviral therapy or Evolution of human immunodeficiency virus type 1 sequences in patients receiving combination antiretroviral therapy. (Carla Kuiken, Kevin Kunstman, Tanmoy Bhattacharya, Jennifer Kunstman, Kristina Kommander, John Phair, Benjamin Good, Satish Pillai, and Steven Wolinsky), Los Alamos report LA-UR-04-5456.
  81. Quantum Feedback Control of Atomic Motion in an Optical Cavity. (Daniel A. Steck, Kurt Jacobs, Hideo Mabuchi, Tanmoy Bhattacharya, and Salman Habib) Los Alamos report LA-UR-03-6826, September 2003; ori:oai:arXiv.org:quant-ph/0310153 . Physical Review Letters 92:22 (2004) 223004; ori:doi:10.1103/PhysRevLett.92.223004; pmid: 15245219. Published Jun 4, 2004. [inspire]. 41 citations as of Apr 13, 2011.
  82. The transition to classical chaos in a coupled quantum system through continuous measurement. (Shohini Ghose, Paul Alsing, Ivan Deutsch, Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) Los Alamos report LA-UR-03-5886, August 2003; ori:oai:arXiv.org:quant-ph/0309093. Physical Review A69:5 (2004) 052116; ori:doi:10.1103/PhysRevA.69.052116. Published May 24, 2004. 18 citations as of Apr 13, 2011.
  83. Improved bilinears in lattice QCD with non-degenerate quarks. (Tanmoy Bhattacharya, Rajan Gupta, Weonjong Lee, Stephen Sharpe, and Jackson M.S. Wu) Los Alamos report LA-UR-03-4939, July 2003; University of Washington report UW/PT 03-20, September 2003. ori:oai:arXiv.org:hep-lat/0511014. Physical Review D73:3 (2006) 034504; ori:doi:10.1103/PhysRevD.73.034504. Published Feb 13, 2006. [inspire]. 15 citations as of Apr 13, 2011.
  84. Scaling behavior of discretization errors in renormalization and improvement constants. (Tanmoy Bhattacharya, Rajan Gupta, Weonjong Lee, and Stephen Sharpe) Los Alamos report LA-UR-03-3849, June 2003. ori:oai:arXiv.org:hep-lat/0509160. Physical Review D73:11 (2006) 114507; ori:doi:10.1103/PhysRevD.73.114507. Published Jun 14, 2006. [inspire]. 5 citations as of Apr 13, 2011.
  85. Timing of the HIV-1 subtype C epidemic in Ethiopia: An improved estimate using maximum likelihood methods. or Molecular Paleontology of HIV-1 M Subtype C in Ethiopia. (Una Smith, Tanmoy Bhattacharya, and Carla L. Kuiken) Los Alamos report LA-UR-02-7315, November 2002.
  86. Continuous Quantum Measurement and the Quantum to Classical Transition. (Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) Los Alamos report LA-UR-02-5289, August 2002; ori:oai:arXiv.org:quant-ph/0211036. Physical Review A67:4 (2003) 042103; ori:doi:10.1103/PhysRevA.67.042103. Published Apr 8, 2003. 16 citations as of Apr 13, 2011.
  87. Recovering Classical Dynamics from Coupled Quantum Systems through Continuous Measurement. (Shohini Ghose, Paul Alsing, Ivan Deutsch, Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) Los Alamos report LA-UR-02-5290, August 2002; ori:oai:arXiv.org:quant-ph/0208064. Physical Review A67:5 (2003) 052102; ori:doi:10.1103/PhysRevA.67.052102. Published May 20, 2003. 4 citations as of Apr 13, 2011.
  88. Diversity Considerations in HIV-1 Vaccine Selection (Brian Gaschen, Jesse Taylor, Karina Yusim, Brian Foley, Feng Gao, Dorothy Lang, Vladimir Novitsky, Barton Haynes, Beatrice H. Hahn, Tanmoy Bhattacharya, and Bette Korber) Science 296:5577 (2002) 23542360. (June 28, 2002; number 5577) ori:doi:10.1126/science.1070441; pmid: 12089434. Available without subscription. Consensus and Ancestral State HIV Vaccines: Response (F. Gao, T. Bhattacharya, B. Gaschen, J. Taylor, J.P. Moore, V. Novitsky, K. Yusim, D. Lang, B. Foley, S. Beddows, M. Alam, B. Haynes, B.H. Hahn, and B. Korber) Science 299:5612 (2003) 15171518. (March 7, 2003; number 5612); ori:doi:10.1126/science.299.5612.1515c; author reply in pmid: 12624248. 317+7 citations as of Apr 13, 2011.
  89. Strange Happenings at the Quantum-Classical Boundary: The Delta-Kicked Rotor. or The δ-function-kicked rotor: Momentum diffusion and the quantum-classical boundary. (T. Bhattacharya, S. Habib, K. Jacobs, and K. Shizume) Los Alamos report LA-UR-01-1909 May 2001. Los Alamos report LA-UR-01-6307, November 2001. ori:oai:arXiv.org:quant-ph/0105086. Physical Review A65:3 (2002) 032115; ori:doi:10.1103/PhysRevA.65.032115. Published Feb 20, 2002. 8 citations as of Apr 13, 2011.
  90. Using Human Immunodeficiency Virus Type 1 Sequences to Infer Historical Features of the Acquired Immune Deficiency Syndrome Epidemic and Human Immunodeficiency Virus Evolution. (Karina Yusim, Martine Peeters, Oliver G. Pybus, Tanmoy Bhattacharya, Éric Delaporte, Claire Mulanga, Mark Muldoon, James Theiler, and Bette Korber) Philosophical Transactions of the Royal Society, London, B 356 (2001) 855866; ori:doi:10.1098/rstb.2001.0859; pmid: 11405933; PMC1088479. 34 citations as of Apr 13, 2011.
  91. Order a Improved Renormalization Constants. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-00-3538 and University of Washington report UW/PT-00-16, September 2000. ori:oai:arXiv.org:hep-lat/0009038. Physical Review D63:7 (2001) 074505; ori:doi:10.1103/PhysRevD.63.074505. Published Mar 13, 2001. [inspire]. 67 citations as of Apr 13, 2011.
  92. Timing the Ancestor of the HIV-1 Pandemic Strains. (B. Korber, M. Muldoon, J. Theiler, F. Gao, R. Gupta, A. Lapedes, B.H. Hahn, S. Wolinsky, and T. Bhattacharya) Science 288:5472 (2000) 17891796. (June 9, 2000; number 5472) ori:doi:10.1126/science.288.5472.1789; pmid: 10846155. Search for the Origin of HIV and AIDS : Response. (B. Korber, T. Bhattacharya, J. Theiler, R. Gupta, A. Lapedes, B. Hahn, F. Gao, M. Muldoon, and S. Wolinsky) Science 289:5482 (2000) 11401141. (August 18, 2000; number 5482) ori:doi:10.1126/science.289.5482.1140; part of pmid: 10970225. 395+5 citations as of Apr 13, 2011.
  93. Continuous Quantum Measurement and the Emergence of Classical Chaos. (T. Bhattacharya, S. Habib, and K. Jacobs) Los Alamos report LA-UR-99-3187 June 1999. ori:oai:arXiv.org:quant-ph/9906092. Physical Review Letters 85:23 (2000) 48524855; ori:doi:10.1103/PhysRevLett.85.4852; pmid: 11102134. [inspire]. 60 citations as of Apr 13, 2011.
  94. Non-perturbative Renormalization Constants using Ward Identities. (T. Bhattacharya, S. Chandrasekharan, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LAUR-99-1717, University of Washington report UW-PT/98-15, University of Tsukuba report UTCCP-P-56, and Duke University report DUKE-TH-99-185, April 1999. ori:oai:arXiv.org:hep-lat/9904011 Physics Letters B461:1–2 (1999) 7988; ori:doi:10.1016/S0370-2693(99)00796-0. [inspire]. 27 citations as of Apr 13, 2011.
  95. Heavy-light Mesons and Baryons with b quarks. (A. Ali Khan, T. Bhattacharya, S. Collins, C.T.H. Davies, R. Gupta, C. Morningstar, J. Shigemitsu, and J. Sloan) Los Alamos report LAUR-99-723, OSU report OHSTPY-HEP-T-98-018, and University of Tsukuba report UTCCP-P-77, December 1999. ori:oai:arXiv.org:hep-lat/9912034 Physical Review D62:5 (2000) 054505; ori:doi:10.1103/PhysRevD.62.054505. Published Jul 27, 2000. [inspire]. 61 citations as of Apr 13, 2011.
  96. B Meson Decay Constants from NRQCD. (A. Ali Khan, T. Bhattacharya, S. Collins, C.T.H. Davies, R. Gupta, C. Morningstar, J. Shigemitsu, and J. Sloan) Los Alamos report LA-UR-97-4642 and OSU report OHSTPY-HEP-T-97-017, January 1998. ori:oai:arXiv.org:hep-lat/9801038 Physics Letters B427:1–2 (1998) 132140; ori:doi:10.1016/S0370-2693(98)00323-2. [inspire]. 48 citations as of Apr 13, 2011.
  97. Duality and the Extraction of Light Quark Masses From Finite Energy and QCD Sum Rules. or Extraction of Light Quark Masses from Sum Rule Analyses of Axial Vector and Vector Current Ward IDentities. (Tanmoy Bhattacharya, Rajan Gupta, and Kim Maltman) Los Alamos report LA-UR-96-2698, March 1997. ori:oai:arXiv.org:hep-ph/9703455 Physical Review D57:9 (1998) 54555467; ori:doi:10.1103/PhysRevD.57.5455. [inspire]. 31 citations as of Apr 13, 2011.
  98. Matrix Elements of 4-fermion Operators with Quenched Wilson Fermions. (R. Gupta, T. Bhattacharya, and S. Sharpe) Los Alamos report LA-UR-96-1829 and University of Washington report UW/PT-96-12, November 1996. ori:oai:arXiv.org:hep-lat/9611023 Physical Review D55:7 (1997) 40364054; ori:doi:10.1103/PhysRevD.55.4036. [inspire]. 127 citations as of Apr 13, 2011.
  99. Comment on “Gravitationally Induced Neutrino-Oscillation Phases.” or Gravitationally induced neutrino oscillation phases in static spacetimes (T. Bhattacharya, S. Habib, and E. Mottola) ori:oai:arXiv.org:gr-qc/9605074 Physical Review D59:6 (1999) 067301; ori:doi:10.1103/PhysRevD.59.067301. [spires(eprint), spires(paper)]. 14+34 citations as of Apr 13, 2011.
  100. Light Quark Masses from Lattice QCD. (R. Gupta and T. Bhattacharya) Los Alamos report LA-UR-96-1840, May 1996. ori:oai:arXiv.org:hep-lat/9605039 Physical Review D55:11 (1997) 72037217; ori:doi:10.1103/PhysRevD.55.7203. [inspire]. 116 citations as of Apr 13, 2011.
  101. Large q Expansion of the 2D q-states Potts' Model. (T. Bhattacharya, R. Lacaze and A. Morel) Saclay report SACLAY-SPHT-96-001, January 1996. ori:oai:arXiv.org:hep-lat/9601012 Journal of Physics I7:1 (1997) 81103; ori:doi:10.1051/jp1:1997127. [inspire].
  102. Hadron Spectrum with Wilson fermions. (T. Bhattacharya, R. Gupta, G. Kilcup, and S. Sharpe) Los Alamos report LA-UR-95-2354, October 1995. ori:oai:arXiv.org:hep-lat/9512021 Physical Review D53:11 (1996) 64866508; ori:doi:10.1103/PhysRevD.53.6486; pmid: 10019932. [inspire]. 65 citations as of Apr 13, 2011.
  103. Decay Constants with Wilson Fermions at β=6.0. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-95-2355, October 1995. ori:oai:arXiv.org:hep-lat/9510044 Physical Review D54:1 (1996) 11551166; ori:doi:10.1103/PhysRevD.54.1155; pmid: 10020582. [inspire]. 21 citations as of Apr 13, 2011.
  104. Large Energy Cumulants in the 2-d Potts' Model and their Effects in Finite Size Analysis. (T. Bhattacharya, R. Lacaze, and A. Morel) Saclay Preprint SACLAY-SPHT-94-008, July 1994. ori:oai:arXiv.org:hep-lat/9407004 Nuclear Physics B435:3 (1995) 526554; ori:doi:10.1016/0550-3213(94)00393-S. [inspire]. 13 citations as of Apr 13, 2011.
  105. Semileptonic Form-Factors of Heavy-Light Mesons From Lattice QCD. (R. Gupta, T. Bhattacharya, and D. Daniel) Los Alamos report, LA-UR-93-3580, October 1993. ori:oai:arXiv.org:hep-lat/9310007 5 citations as of Apr 13, 2011.
  106. The Free Energy of the Potts' Model: From the Continuous to the First Order Transition Region. (T. Bhattacharya, R. Lacaze, and A. Morel) Saclay report SACLAY-SPHT-93-022, March 1993. ori:oai:arXiv.org:hep-th/9303075 Europhys. Lett. 23 (1993) 547. ori:doi:10.1209/0295-5075/23/8/002. [inspire]. 15 citations as of Apr 13, 2011.
  107. Critical Behavior of the Antiferromagnetic Heisenberg Model on a Stacked Triangular Lattice. (T. Bhattacharya, A. Billoire, R. Lacaze, and Th. Jolicœur) Saclay report SACLAY-SPHT-93-015, February 1993. ori:oai:arXiv.org:cond-mat/9302019 Journal of Physics I4:2 (1994) 181186; ori:doi:10.1051/jp1:1994131. [inspire]. 21 citations as of Apr 13, 2011.
  108. Z(N) Interface Tension in a Hot SU(N) Gauge Theory. (T. Bhattacharya, A. Gocksch, C.P. Korthals Altes, and R.D. Pisarski) Brookhaven Preprint BNL-47625, February 1992. ori:oai:arXiv.org:hep-ph/9205231 Nuclear Physics B383:3 (1992) 497524; ori:doi:10.1016/0550-3213(92)90086-Q. [inspire]. 91 citations as of Apr 13, 2011.
  109. Particles Near Threshold. (T. Bhattacharya and S. Willenbrock) Brookhaven Preprint BNL-46481, July 1991. Physical Review D47:9 (1993) 40224027; ori:doi:10.1103/PhysRevD.47.4022; pmid: 10016028. [inspire]. 33 citations as of Apr 13, 2011.
  110. Interface Tension in an SU(N) Gauge Theory at High Temperature. (T. Bhattacharya, A. Gocksch, C.P. Korthals Altes, and R.D. Pisarski) Brookhaven Preprint BNL-45297, October 1990. Physical Review Letters 66:8 (1991) 9981000; ori:doi:10.1103/PhysRevLett.66.998; pmid: 10043969; [inspire]. 94 citations as of Apr 13, 2011.
  111. Tree Unitarity in Broken Supergravity. 2. Double Gravitino Amplitude. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-41, October 1988. Nuclear Physics B328:2 (1989) 481; ori:doi:10.1016/0550-3213(89)90338-6. [inspire]. 14 citations as of Apr 13, 2011.
  112. Tree Unitarity in Broken Supergravity. 1. Single Gravitino Amplitude. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-38, June 1988. Nuclear Physics B328:2 (1989) 469; ori:doi:10.1016/0550-3213(89)90337-4. [inspire]. 11 citations as of Apr 13, 2011.
  113. Role of Chiral Scalar and Pseudoscalar in Two Photon Production of a Superlight Gravitino. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-11, May 1988. Physical Review D38:7 (1988) 22842287; ori:doi:10.1103/PhysRevD.38.2284; pmid: 9959383; [inspire]. 36 citations as of Apr 13, 2011.
  114. Unitarity Limit on the Gaugino-Gravitino Mass Ratio. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-4, March 1988. Physics Letters B206:4 (1988) 655660; ori:doi:10.1016/0370-2693(88)90713-7 [inspire]. 28 citations as of Apr 13, 2011.
  115. Probing a Superlight Gravitino in Photon-Photon Collisions. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/87-15, July 1987. Physical Review Letters 59:14 (1987) 15171520, ori:doi:10.1103/PhysRevLett.59.1517; pmid: 10035256; ERRATUM ibid. 60:14 (1988) 1455, ori:doi:10.1103/PhysRevLett.60.1455.2. [inspire]. 24 citations as of Apr 13, 2011.
  116. Constraint on Unstable Photino Mass from an Ultralight Gravitino. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/87-1, Mar 1987. Pramana 28:6 (1987) L699L703, ori:doi:10.1007/BF02892872. [inspire]. 1 citation as of Apr 13, 2011.
  117. The Gel'fand Realization and the Exceptional Representations of SL(2,R). (D. Basu and T. Bhattacharya) Journal of Mathematical Physics 26:1 (1985) 1217; ori:doi:10.1063/1.526799. [inspire].

Talks, Abstracts, and Unreferreed Publications

This section contains a bunch of talk abstracts that appeared in published lists of abstracts, unrefereed talks that were written up, and certain miscellaneous kinds of unreferreed publications (e.g., prefaces, articles for internal publication). If it is refereed and appeared as a full paper (e.g., in computer science), it is included in the first section, not here. Proceedings in which only a collaboration I am part of, but not me personally, is listed as an author are listed separately in the next section.

  1. The Contribution of Novel CP Violation to the nEDM using Lattice QCD (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, and Boram Yoon) Los Alamos report LA-UR-16-29579, ori:oai:arXiv.org:1701.04132 [hep-lat] Proceedings of the 12th Conference on Quark Confinement and the Hadron Spectrum (Confinement XII), Thessaloniki, Greece, 28 Aug2 Sep 2016. [inspire]
  2. Quark Chromoelectric Dipole Moment Contribution to the Neutron Electric Dipole Moment (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, and Boram Yoon) Los Alamos report LA-UR-16-29167, ori:oai:arXiv.org:1612.08438 [hep-lat] Proceedings of the 34th annual International Symposium on Lattice Field Theory, University of Southampton, UK, 2430 July 2016. Proceedings of Science LATTICE2016 (2017) 225. [inspire]
  3. Nucleon Vector and Axial-Vector Form Factors (Yong-Chull Jang, Tanmoy Bhattacharya, Rajan Gupta, Boram Yoon, and Huey-Wen Lin (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Proceedings of the 34th annual International Symposium on Lattice Field Theory, University of Southampton, UK, 2430 July 2016. Proceedings of Science LATTICE2016 (2017) 178.
  4. Tuning the hopping parameter in the Oktay-Kronfeld action for charm and bottom quarks on a MILC HISQ ensemble (Hwancheol Jeong, Weonjong Li, Jaehoon Leem, Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, and Yong-Chull Jang (LANL-SWME Collaboration)) Los Alamos report LA-UR-17-20003, ori:oai:arXiv.org:1612.05707 [hep-lat] Proceedings of the 34th annual International Symposium on Lattice Field Theory, University of Southampton, UK, 2430 July 2016. Proceedings of Science LATTICE2016 (2017) 380. [inspire]
  5. Lattice QCD calculations of transverse momentum-dependent parton distributions (TMDs). (M. Engelhardt, B. Musch, T. Bhattacharya, J.R. Green, R. Gupta, P. Hägler, S. Krieg, J. Negele, A. Pochinsky, A. Schäfer, S. Syritsyn, B. Yoon) Proceedings of the 6th International Conference on Physics Opportunities at an ElecTron-Ion Collider, Palaiseau, France, 711 September 2015. European Physics Journal Web of Conferences 112 (2016) 01008; ori:doi:10.1051/epjconf/201611201008 Published 21 Mar 2016. [inspire]
  6. Lattice QCD Calculations of Nucleon Transverse Momentum-Dependent Parton Distributions using Clover and Domain Wall Fermions. (Boram Yoon, T. Bhattacharya, M. Engelhardt, J. Green, R. Gupta, P. Hägler, S. Meinel, B.U. Musch, J. Negele, A. Pochinsky, S. Syritsyn) ori:oai:arXiv.org:1601.05717 [hep-lat] Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 1418 July 2015. Proceedings of Science LATTICE 2015 (2016) 116. [inspire]
  7. Neutron Electric Dipole Moment from quark Chromoelectric Dipole Moment. (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emmanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-15-29401, ori:oai:arXiv.org:1601.02264 [hep-lat] Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 1418 July 2015. Proceedings of Science LATTICE 2015 (2016) 238. [inspire]
  8. Nucleon Charges, Form-factors and Neutron EDM. (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, Huey-Wen Lin, Boram Yoon) Los Alamos report LA-UR-15-28920, ori:oai:arXiv.org:1601.01730 [hep-lat] Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 1418 July 2015. Proceedings of Science LATTICE 2015 (2016) 130. [inspire]
  9. Aspects of Lattice QCD Calculations of Transverse Momentum-Dependent Parton Distributions. (M. Engelhardt, B. Musch, T. Bhattacharya, J.R. Green, R. Gupta, P. Hägler, S. Krieg, J. Negele, A. Polchinsky, A. Schäfer, S. Syritsyn, and B. Yoon) Proceedings of the QCD Evolution 2015, Jefferson Lab, Newport News, Virgina, USA, 2630 May 2015. Proceedings of Science QCDEV2015 (2016) 18.
  10. Lattice QCD calculations of nucleon transverse momentum-dependent parton distributions (TMDs) at 170 MeV pion mass. (M. Engelhardt, B. Musch, T. Bhattacharya, R. Gupta, P. Hägler, S. Krieg, J. Negele, A. Polchinsky, A. Schäfer, S. Syritsyn, and B. Yoon) Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 1418 July 2015. Proceedings of Science LATTICE 2015 (2016) 117.
  11. Nucleon transverse momentum-dependent parton distributions from domain wall fermion calculations at 297 MeV pion mass. (Michael Engelhardt, Bernhard Musch, Tanmoy Bhattacharya, Rajan Gupta, Phillip Hägler, John Negele, Andrew Polchinsky, Andreas Schäfer, Sergey Syritsyn, and Boram Yoon) Los Alamos report LA-UR-14-29420, Jefferson Lab report JLAB-THY-14-1971. Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 2328 June 2014. Proceedings of Science LATTICE2014 (2015) 167.
  12. The QCD Equation of State. (Tanmoy Bhattacharya for HotQCD) Los Alamos report LA-UR-14-29319. ori:oai:arXiv.org:1501.07652 [hep-lat] Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 2328 June 2014. Proceedings of Science LATTICE2014 (2015) 225. [inspire]
  13. Precision calculations of nucleon charges gA, gS, gT. (Rajan Gupta, Tanmoy Bhattacharya, Boram Yoon, Anosh Joseph, and Huey-Wen Lin) Los Alamos report LA-UR-14-29293. ori:oai:arXiv.org:1501.07639 [hep-lat] Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 2328 June 2014. Proceedings of Science LATTICE2014 (2015) 152. [inspire]
  14. Disconnected Quark Loop Contributions to Nucleon Structure. (Tanmoy Bhattacharya, Rajan Gupta, and Boram Yoon) Los Alamos report LA-UR-14-28704. ori:oai:arXiv.org:1503.05975 [hep-lat] Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 2328 June 2014. Proceedings of Science LATTICE2014 (2015) 141. [inspire]
  15. Complex Impact of Reversion Mutations and CD8+ T Cell Escape Mutations on HIV-1 Fitness (Hongshuo Song, Tanmoy Bhattacharya, Nilu Goonetilleke, Kevin Wiehe, Andrew McMichael, George Shaw, Beatrice Hahn, Alan Perelson, Barton Haynes, and Feng Gao) Abstract 369 at the Conference on Retroviruses and Opportunistic Infections (CROI), Boston, Massachusetts, USA, 36 March 2014.
  16. Probing TeV Physics through Lattice Neutron-Decay Matrix Elements. (Huey-Wen Lin, Tanmoy Bhattacharya, Saul D. Cohen, Rajan Gupta, Anosh Joseph, Boram Yoon) Proceedings of the 2013 International Workshop on Computational Science and Engineering, Taipei, Taiwan, 1417 October 2013. Proceedings of Science IWCSE2013 (2014) 055. [inspire]
  17. Probing TeV scale physics in precision UCN decays. (Rajan Gupta, Tanmoy Bhattacharya, Anosh Joseph, Saul D. Cohen, and Huey-Wen Lin) Los Alamos report LA-UR-13-29020. ori:oai:arXiv.org:1403.2447 [hep-lat] Proceedings of the 31st International Symposium on Lattice Field Theory, Mainz, Germany, 2013. Proceedings of Science LATTICE 2013 (2013) 409. [inspire]
  18. Neutron Electric Dipole Moments from Beyond the Standard Model Physics. (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta) Los Alamos report LA-UR-13-28859 November 2013. ori:oai:arXiv.org:1403.2445 [hep-lat] Proceedings of the 31st International Symposium on Lattice Field Theory, Mainz, Germany, 2013. Proceedings of Science LATTICE 2013 (2013) 299. [inspire]
  19. Probing novel TeV physics through precision calculations of scalar and tensor charges of the nucleon. (Rajan Gupta, Tanmoy Bhattacharya, Anosh Joseph, Saul Cohen, and Huey-Wen Lin) Los Alamos report LA-UR-12-26832 December 2012. ori:oai:arXiv.org:1212.4889 [hep-lat] Proceedings of the 30th International Symposium on Lattice Field Theory, Cairns, Australia, 2012. Eds. Leinweber, et al. Proceedings of Science Lattice 2012 (2012) 114. [inspire]
  20. Neutron Electric Dipole Moment from Beyond the Standard Model. (Tanmoy Bhattacharya, Vincenzo Cirigliano, and Rajan Gupta) Los Alamos report LA-UR-12-26831 December 2012. ori:oai:arXiv.org:1212.4918 [hep-lat] Proceedings of the 30th International Symposium on Lattice Field Theory, Cairns, Australia, 2012. Eds. Leinweber, et al. Proceedings of Science Lattice 2012 (2012) 179. [inspire]
  21. The Chiral Transition, Deconfinement, and the Equation of State of QCD (Frithjof Karsch, Wolfgang Söldner, A. Bazavov, T. Bhattacharya, M. Cheng, C. DeTar, H.-T. Ding, Steven Gottlieb, R. Gupta, P. Hegde, U.M. Heller, E. Laermann, L. Levkova, S. Mukherjee, P. Petreczky, C. Schmidt, R.A. Soltz, R. Sugar, D. Toussaint, W. Unger, and P. Vranas) Proceedings of the NIC Symposium, 2012. 18, 15.
  22. Worldline Method for Electromagnetic Casimir Energies. (Jonathan Mackrory, Tanmoy Bhattacharya, and Daniel Steck) 43rd Annual Meeting of the APS Division of Atomic, Molecular and Optical Physics, Orange County, California, June 48 2012. Bulletin of the American Physical Society 57:5 (2012) BAPS.2012.DAMOP.D1.153.
  23. Probing TeV scale physics via ultra cold neutron decays and calculating non-standard baryon matrix elements (Rajan Gupta, Tanmoy Bhattacharya, Anosh Joseph, Huey-Wen Lin, and Saul D. Cohen) Los Alamos report LA-UR-12-10238 February 2012. ori:oai:arXiv.org:1202.1320 [hep-lat] Proceedings of the 29th International Symposium on Lattice Field Theory, Squaw Valley, Lake Tahoe, California, USA, 2011. Eds. Juge, et al. Proceedings of Science LATTICE 2011 (2011) 271. [inspire]
  24. Theoretical Bounds on New Four-Fermion Interactions and TeV Scale Physics (Tanmoy Bhattacharya, Rajan Gupta, Anosh Joseph, Huey-Wen Lin, and Saul D. Cohen) Los Alamos report LA-UR-12-20294 March 2012. ori:oai:arXiv.org:1203.6843 [hep-lat] Proceedings of the 29th International Symposium on Lattice Field Theory, Squaw Valley, Lake Tahoe, California, USA, 2011. Eds. Juge, et al. Proceedings of Science LATTICE 2011 (2011) 272. [inspire]
  25. Probing TeV Physics through Lattice Neutron-Decay Matrix Elementa (Huey-Wen Lin, Saul D. Cohen, Tanmoy Bhattacharya, Rajan Gupta, and Anosh Joseph) Proceedings of the 29th International Symposium on Lattice Field Theory, Squaw Valley, Lake Tahoe, California, USA, 2011. Eds. Juge, et al. Proceedings of Science LATTICE 2011 (2011) 273.
  26. Genital tract sequestration of SIV during acute infection (James B. Whitney, Peter Hraber, Corinne Luedemann, Tanmoy Bhattacharya, Srinivas S. Rao, John R. Mascola, Bette T. Korber, Gary J. Nabel, and Norman L. Letvin) Journal of Medical Primatology 40:4 (2011) 283. in ori:doi:10.1111/j.1600-0684.2011.00491.x
  27. Computationally identified mutations suspected to cause gp120 charge inversion and gp41-mediated allosteric effects impact IgG1b12 suspectibility. (A.R. Geonnotti, S. Gnanakaran, M.G. Daniels, T. Bhattacharya, A.S. Lapedes, B. Korber, and D.C. Montefiori) Abstracts from AIDS Vaccine 2010, Atlanta, Georgia, USA 28 September1 October, 2010. Published in AIDS Research and Human Retroviruses 26:10 (Oct 15, 2010) A-1-A-184 ori:doi:10.1089/aid.2010.9998
  28. The HotQCD Collaboration (A. Bazavov, T. Bhattacharya, M. Cheng, N.H. Christ, C. DeTar, S. Ejiri, Steven Gottlieb, R. Gupta, U.M. Heller, K. Huebner, C. Jung F. Karsch E. Laermann L. Levkova C. Miao R.D. Mawhinney P. Petreczky C. Schmidt R.A. Soltz W. Soeldner R. Sugar D. Toussaint P. Vranas) Proceeding of Quark Matter 2009—21st International Conference on Ultrarelativistic Nucleus-Nucleus Collision, Nuclear Physics A830:1–4 (2009) 958c; ori:doi:10.1016/j.nuclphysa.2009.10.149. Available online 10 November 2009
  29. Quantifying semantic shift for reconstructing language families (W. Croft, C. Beckner, L. Sutton, J. Wilkins, T. Bhattacharya, and D. Hruschka) Poster presented at the 83rd Annual meeting of the Lingustics Society of America, San Francisco, California, USA, 2009. Unpublished
  30. Age-structured Stochastic Model of Intrapatient HIV Evolution (Elena E Giorgi, Alan S Perelson, and (Tanmoy Bhattacharya) 3rd q-bio Conference c2.016
  31. P09-21. Deep sequencing of HIV-1 from acute infection: low initial diversity, and rapid but variable CTL escape. (W. Fischer, B. Keele, T. Bhattacharya, C. Lo, E. Giorgi, P. Hraber, T. Leitner, C. Han, C. Gleasner, L. Green, B. Hahn, G. Shaw, B. Haynes, and B. Korber) Abstracts from AIDS Vaccine 2009, 1922 October, 2009. Retrovirology 6:Suppl 3 (2009) P401 ori:doi:10.1186/1742-4690-6-S3-P401
  32. P04-54. Genetic signature analysis identifies the CD4i region of gp120 as a determinant of broadly NAb responses in HIV-1-infected individuals. (S. Gnanakaran, T. Bhattacharya, M. Daniels, A. Lapedes, F. Gao, A. Kumar, M. Li, H. Tang, K. Greene, H. Gao, M. Seaman, B.F. Haynes, D.C. Montefiori, B.T. Korber) Abstracts from AIDS Vaccine 2009, 1922 October, 2009. Retrovirology 6:Suppl 3 (2009) P394 ori:doi:10.1186/1742-4690-6-S3-P394
  33. The Petaflops Router: Harnessing FPGAs and Accelerators for High Performance Computing (Zachary K. Baker, Tanmoy Bhattacharya, Mark Dunham, Paul S. Graham, Rajan Gupta, Jeff Inman, Andreas Klein, Gerd J. Kunde, Al McPherson, Matt Stettler, and Justin L. Tripp) Proceedings of the Thirteenth Annual Workshop of High Performance Embedded Computing (HPEC 2009), Lexington, Massachusetts, USA, 22 September 2009. Poster A.4.
  34. 017. Low dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1 (Brandon Keele, Hui Li, Elena Giorgi, Peter Hraber, Chuanxi Sun, Truman Grayson, Wendy Yeh, Tanmoy Bhattacharya, Bette Korber, Barton Haynes, Gary Nabel, Norman Letvin, Beatrice Hahn and George Shaw) Abstracts from 26th Annual Symposium of Nonhuman Primate Models for AIDS. Journal of Medical Primatology 38:Suppl. 1 (2009) 57. Part of ori:doi:10.1111/j.1600-0684.2009.00376.x
  35. Computational Approaches to Viral Evolution and Rational Vaccine Design (Tanmoy Bhattacharya) American Physical Society, Four Corners Section of the APS Fall Meeting, October 67 2006 Abstract number #B1.001
  36. Rational design of HCV vaccine cocktails that maximize coverage of potential CTL epitopes (K Yusim, W Fischer, S Perkins, T Bhattacharya, J Theiler, T Allen, G Lauer, B Korber, and C Kuiken) Abstracts from the 12th International Symposium on Viral Hepatitis and Liver Disease, Paris, France, July 15, 2006. Journal of Clinical Virology 36:suppl.2 (Jul 2006) S164S165. ori:doi:10.1016/S1386-6532(06)80511-1
  37. HLA-associated sequence polymorphisms in HCV reveal the reproducibility of immune responses and constraints on viral evolution. (J Timm, B Li, T Bhattacharya, MG Daniels, LL Reyor, R Allgaier, T Kuntzen, W Fischer, J Duncan, J Schulze zur Wiesch, A Kim, N Frahm, C Brander, RT Chung, GM Lauer, BT Korber, BD Walker, and TM Allen) Abstracts from the 12th International Symposium on Viral Hepatitis and Liver Disease, Paris, France, July 15, 2006. Journal of Clinical Virology 36:suppl.2 (Jul 2006) S119S120. ori:doi:10.1016/S1386-6532(06)80371-9
  38. Chiral lattice gauge theories from warped domain walls and Ginsparg-Wilson fermions (Tanmoy Bhattacharya, Matthew R. Martin, Erich Poppitz) Los Alamos report LA-UR-06-7328 October 2006. Proceedings of the 24th International Symposium on Lattice Field Theory, Tucson, Arizona, USA, 2006. Eds. Morningstar, et al. Proceedings of Science LAT2006 (2006) 048.
  39. Towards a chiral gauge theory by deconstruction in AdS5 (Tanmoy Bhattacharya, Rajan Gupta, Matthew R. Martin, Yuri Shirman, Csaba Csáki, and John Terning) Los Alamos report LA-UR-05-7739 October 2005. ori:oai:arXiv.org:hep-lat/0510073 Proceedings of the 23rd International Symposium on Lattice Field Theory, Dublin, Ireland, 2005. Eds. Michael, et al. Proceedings of Science LAT2005 (2005) 136. [inspire]
  40. Chaos and Quantum Mechanics (Salman Habib, Tanmoy Bhattacharya, Benjamin Greenbaum, Kurt Jacobs, Kosuke Shizume, and Bala Sundaram), Los Alamos report LA-UR-05-2905, April 2005. ori:oai:arXiv.org:quant-ph/0505085 Proceedings of the 16th Florida Workshop in Nonlinear Astronomy and Physics; 2004. Eds. Gottesman, et al., Nonlinear Dynamics in Astronomy and Physics: In Memory of Henry Kandrup,’ Annals of the New York Academy of Sciences 1045 (2005) 308332; ori:doi:10.1196/annals.1350.026; pmid: 15980320.
  41. Nonlinear Quantum Dynamics (Salman Habib, Tanmoy Bhattacharya, Benjamin Greenbaum, Andrew Doherty, Benjamin Greenbaum, Asa Hopkins, Kurt Jacobs, Hideo Mabuchi, and Keith Schwab, Kosuke Shizume, Daniel A. Steck, and Bala Sundaram), Los Alamos report LA-UR-05-0368, August 2004. ori:oai:arXiv.org:quant-ph/0505046 NATO Advanced Research Workshop, Nonlinear Dynamics and Fundamental Interactions, Tashkent, October, 2004.
  42. Calculating ε'/ε Using HYP staggered fermions. (T. Bhattacharya, G.T. Fleming, R. Gupta, G. Kilcup, W. Lee, and S. Sharpe), Seoul National University report SNUTP-04-015, Los Alamos report LA-UR-04-5236, August 2004. ori:oai:arXiv.org:hep-lat/0409046 Proceedings of the 22nd International Symposium on Lattice Field Theory, Batavia, Illinois, USA, 2003. Eds. Bodwin, et al., Nuclear Physics (Proceedings Supplement) B140 (2005) 369371; ori:doi:10.1016/j.nuclphysbps.2004.11.256. [inspire]. 14 citations as of Apr 13, 2011.
  43. Calculating weak matrix elements using HYP fermions. (T. Bhattacharya, G. T. Fleming, G. Kilcup, R. Gupta, W. Lee, and S. Sharpe), Los Alamos report LA-UR-03-6654, Seoul National University report SNUTP-03-020, and University of Washington report UW-PT 03-19, September 2003. ori:oai:arXiv.org:hep-lat/0309105 Proceedings of the 21st International Symposium on Lattice Field Theory, Tsukuba, Japan, 2003. Eds. S. Aoki, et al., Nuclear Physics (Proceedings Supplement) B129&130 (2004) 257259; ori:doi:10.1016/S0920-5632(03)02547-7. [inspire]. 4 citations as of Apr 13, 2011.
  44. Improved bilinears in unquenched lattice QCD. (Tanmoy Bhattacharya, Rajan Gupta, Weonjong Lee, Stephen R. Sharpe, and Jackson M.S. Wu), Los Alamos report LA-UR-03-6623, Seoul National University report SNUTP-03-019, and University of Washington report UW-PT 03-12, September 2003. ori:oai:arXiv.org:hep-lat/0309087 Proceedings of the 21st International Symposium on Lattice Field Theory, Tsukuba, Japan, 2003. Eds. S. Aoki, et al., Nuclear Physics (Proceedings Supplement) B129&130 (2004) 441443; ori:doi:10.1016/S0920-5632(03)02608-2. [inspire]. 2 citations as of Apr 13, 2011.
  45. Recovering classical chaotic dynamics from coupled quantum systems through continuous measurements (Paul M Alsing, Shohini Ghose, Ivan Deutsch, Salman Habib, Tanmoy Bhattacharya, and Kurt Jacobs) 34th Meeting of the Division of Atomic, Molecular and Optical Physics, Boulder, Colorado, USA, May 2024 2003 Abstract number #H5.009
  46. Quantum And Classical Dynamics Of Atoms In A Magneto-optical Lattice. (Shohini Ghose, Paul M. Alsing, Ivan H. Deutsch, Poul S. Jessen, David L. Haycock, Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) ori:oai:arXiv.org:quant-ph/0210131. Proceedings of the 7th Experimental Chaos Conference, San Diego, California, USA, 2002, Eds. Visarath In, et al., AIP Conference Proceedings 676 (2003) 283294; ori:doi:10.1063/1.1612224.
  47. Progress report on staggered ε'/ε project. (T. Bhattacharya, G. T. Fleming, G. Kilcup, R. Gupta, W. Lee, and S. Sharpe) Seoul National University report SNUTP-02-028, August 2002. ori:oai:arXiv.org:hep-lat/0208050. Proceedings of the 20th International Symposium on Lattice Field Theory, Boston, Massachusetts, USA, 2002, Eds. M. Edwards, et al., Nuclear Physics (Proceedings Supplement) B119 (2003) 428430; ori:doi:10.1016/S0920-5632(03)01576-7; [inspire]. 3 citations as of Apr 13, 2011.
  48. Preface (T. Bhattacharya and N. Cooper) to Los Alamos Science 27 (2002) xxxii
  49. Emergence of Classical Dynamics in a Quantum World. (T. Bhattacharya, S. Habib, and K. Jacobs) Los Alamos report LA-UR-02-0786, March 2002. ori:oai:arXiv.org:quant-ph/0407096 Los Alamos Science 27 (2002) 110125
  50. Recovering the Classical Limit of a System with Spin via Continuous Measurement. (Shohini Ghose, Ivan Deutsch, Paul Alsing, Kurt Jacobs, Tanmoy Bhattacharya, and Salman Habib) American Physical Society, 2002 Division of Atomic, Molecular, and Optical, Abstract #L4.004
  51. Tracking the Worldwide Subtype C Epidemic (C Kuiken, UR Smith, D Lang, T Bhattacharya) 9th Conference on Retroviruses and Opportunistic Infections, Seattle, Washington, USA, February 2428 2002 Abstract number 18
  52. Scaling Behavior of Improvement and Renormalization Constants. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-01-5861, November 2001. ori:oai:arXiv.org:hep-lat/0111001 Proceedings of the 19th International Symposium on Lattice Field Theory, Berlin, Germany, 2001, Eds. M. Müller-Preussker, et al., Nuclear Physics (Proceedings Supplement) B106-107 (2002) 789791; ori:doi:10.1016/S0920-5632(01)01844-8. [inspire]. 22 citations as of Apr 13, 2011.
  53. The Evolutionary and Biogeographic History of HIV-1 Subtype C (UR Smith, CL Kuiken, T Bhattacharya) AIDS vaccine 2001, Philadelphia, Pennsylvania, USA, September 58 2001 Abstract number 264
  54. Weak Matrix Elements for CP Violation. (T. Bhattacharya, G.T. Fleming, G. Kilcup, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-01-5951, November 2001. ori:oai:arXiv.org:hep-lat/0111004 Proceedings of the 19th International Symposium on Lattice Field Theory, Berlin, Germany, 2001, Eds. M. Müller-Preussker, et al., Nuclear Physics (Proceedings Supplement) B106-107 (2002) 311313; ori:doi:10.1016/S0920-5632(01)01698-X. [inspire]. 21 citations as of Apr 13, 2011.
  55. Renormalization Constants using Quark States in Landau gauge. (T. Bhattacharya, R. Gupta, and W. Lee) Los Alamos report LA-UR-01-5950, November 2001. ori:oai:arXiv.org:hep-lat/0111002 Proceedings of the 19th International Symposium on Lattice Field Theory, Berlin, Germany, 2001, Eds. M. Müller-Preussker, et al., Nuclear Physics (Proceedings Supplement) B106-107 (2002) 786788; ori:doi:10.1016/S0920-5632(01)01843-6. [inspire]. 3 citations as of Apr 13, 2011.
  56. Renormalization Constants using Quark States in Fixed Gauge. (T. Bhattacharya, R. Gupta, and W. Lee) Los Alamos report LA-UR-01-0355, June 2001. ori:oai:arXiv.org:hep-lat/0106007 Proceedings of the 18th International Symposium on Lattice Field Theory, Bangalore, India, 2000, Eds. T. Bhattacharya, et al., Nuclear Physics (Proceedings Supplement) B94 (2001) 595598; ori:doi:10.1016/S0920-5632(01)00874-X. [inspire]. 1 citation as of Apr 13, 2011.
  57. Continuous measurement and the classical limit of the motion of an atom in a magneto-optical double-well potential. (S. Ghose, P.M. Alsing, I.H. Deutsch, K. Jacobs, T. Bhattacharya, S. Habib) Proceedings of the Quantum Electronics and Laser Science Conference. May 11, 2001, Baltimore, MD, USA Conference Edition-6 9192. ori:doi:10.1109/QELS.2001.961897.
  58. Detailed analysis of the evolution of HIV-1 subtype C (C Kuiken, BT Korber, B Foley, and T Bhattacharya) Proceedings of the 2000 International Meeting of Institute of Human Virology, Baltimore, Maryland, USA, 2000. Journal of Human Virology 3:5 (SepOct 2000) 272.
  59. Improvement and Renormalization Constants in O(a) Improved Lattice QCD. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-00-5683, August 2000. ori:oai:arXiv.org:hep-lat/0101007 Proceedings of the 18th International Symposium on Lattice Field Theory, Bangalore, India, 2000, Eds. T. Bhattacharya, et al., Nuclear Physics (Proceedings Supplement) B94 (2001) 599602; ori:doi:10.1016/S0920-5632(01)00935-5. [inspire].
  60. Timing the origin of the HIV-1 pandemic (B Korber, M Muldoon, J Theiler, F Gao, R Gupta, A Lapedes, BH Hahn, S Wolinsky, and T Bhattacharya) 7th Annual Conference on Retroviruses and Opportunisitic Infections, San Francisco, California, USA, June 2000.
  61. Fixed-point Pure Gauge Action using b = √3 RGT. (T. Bhattacharya, R. Gupta, and W. Lee) Los Alamos report LA-UR-99-4709, October 1999. ori:oai:arXiv.org:hep-lat/9910046 Proceedings of the 17th International Symposium on Lattice Field Theory, Pisa, Italy, 1999, Eds. M. Campostrini, et al., Nuclear Physics (Proceedings Supplement) B83-84 (2000) 860862; ori:doi:10.1016/S0920-5632(00)91827-9. [inspire]. 3 citations as of Apr 13, 2011.
  62. Order a Improved Renormalization Constants. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-99-4973, June 1999. ori:oai:arXiv.org:hep-lat/9909115 Proceedings of the 17th International Symposium on Lattice Field Theory, Pisa, Italy, 1999, Eds. M. Campostrini, et al., Nuclear Physics (Proceedings Supplement) B83-84 (2000) 851853; ori:doi:10.1016/S0920-5632(00)00462-X. [inspire]. 6 citations as of Apr 13, 2011.
  63. Non-perturbative Improvement of Bilinears in Unquenched QCD. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-99-4974 and University of Washington report UW-PT/99-21, June 1999. ori:oai:arXiv.org:hep-lat/9909092 Proceedings of the 17th International Symposium on Lattice Field Theory, Pisa, Italy, 1999, Eds. M. Campostrini, et al., Nuclear Physics (Proceedings Supplement) B83-84 (2000) 902904; ori:doi:10.1016/S0920-5632(00)00410-2. [inspire]. 8 citations as of Apr 13, 2011.
  64. Dynamics of the Conformal Mode and Simplicial Gravity. (S. Catterall, E. Mottola, and T. Bhattacharya) ori:oai:arXiv.org:hep-lat/9809114 Proceedings of the 16th International Symposium on Lattice Field Theory, Boulder, Colorado, USA, 1998, Eds. T. De Grand, et al., Nuclear Physics (Proceedings Supplement) B73 (1999) 792794; ori:doi:10.1016/S0920-5632(99)85205-0. [inspire]. 1 citation as of Apr 13, 2011.
  65. Non-perturbative Renormalization Constants using Ward Identities. (T. Bhattacharya, S. Chandrasekharan, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-98-4267, July 1998. ori:oai:arXiv.org:hep-lat/9810018 Proceedings of the 16th International Symposium on Lattice Field Theory, Boulder, Colorado, USA, 1998, Eds. T. De Grand, et al., Nuclear Physics (Proceedings Supplement) B73 (1999) 276278; ori:doi:10.1016/S0920-5632(99)85046-4. [inspire]. 6 citations as of Apr 13, 2011.
  66. fB and fBs using NRQCD. (T. Bhattacharya) Los Alamos report LAUR-98-4266, July 1998. ori:oai:arXiv.org:hep-lat/9810015 Proceedings of the 16th International Symposium on Lattice Field Theory, Boulder, Colorado, USA, 1998, Eds. T. De Grand, et al., Nuclear Physics (Proceedings Supplement) B73 (1999) 369371; ori:doi:10.1016/S0920-5632(99)85076-2. [inspire]. 2 citations as of Apr 13, 2011.
  67. Light Fermion Masses from Lattice QCD. (T. Bhattacharya) American Physical Society, APS/AAPT Joint April Meeting, Columbus, Ohio, USA, 1821 April 1998, Abstract #3WK.06
  68. Hadron Spectroscopy with NRQCD b quarks. (C. Davies, A. Ali Khan, J. Shigemitsu, J. Sloan, S. Collins, T. Bhattacharya, and R. Gupta) American Physical Society, APS/AAPT Joint April Meeting, Columbus, Ohio, USA, 1821 April 1998, Abstract #M16.84
  69. Advances in Determination of Quark Masses. (T. Bhattacharya and R. Gupta) Los Alamos report LAUR-97-4355, July 1997. ori:oai:arXiv.org:hep-lat/9710095 Proceedings of the 15th International Symposium on Lattice Field Theory, Edinburgh, Scotland, 1997, Eds. C.T.H. Davies, et al., Nuclear Physics (Proceedings Supplement) B63 (1998) 95107; ori:doi:10.1016/S0920-5632(97)00701-9. [inspire]. 26 citations as of Apr 13, 2011.
  70. Problems with Conventional Sum Rule Analyses for the Light Quark Masses and a New Analysis of ms. (Kim Maltman Rajan Gupta, and Tanmoy Bhattacharya) Proceedings of the 15th International Conference On Few-Body Problems In Physics (FB 97), Groningen, the Netherlands, 1996, Eds. J.C.S. Bacelar, et al., Nuclear Physics A631 (1998) 497c501c; ori:doi:10.1016/S0375-9474(98)00055-4. [inspire]. 3 citations as of Apr 13, 2011.
  71. Sum Rule Analyses for The Light Quark Masses Revisited. (Kim Maltman R. Gupta, and T. Bhattacharya) Proceedings of the 6th Conference On The Intersections Of Particle And Nuclear Physics (CIPANP 97), Big Sky, Montana, USA, 1997, Ed. T.W. Donnely, AIP Conference Proceedings 412 (1997) 736738; (abstract available online)
  72. B and Bc Mesons with NRQCD and Clover Actions. (A. Ali Khan and T. Bhattacharya) Los Alamos report LA-UR-96-3338, May 1996. ori:oai:arXiv.org:hep-lat/9609048 Proceedings of the 14th International Symposium on Lattice Field Theory, St. Louis, USA, 1996, Eds. C. Bernard, et al., Nuclear Physics (Proceedings Supplement) B53 (1997) 368373; ori:doi:10.1016/S0920-5632(96)00662-7. [inspire]. 11 citations as of Apr 13, 2011.
  73. Light Quark Masses and the CP violation parameter ε'/ε. (R. Gupta and T. Bhattacharya) Los Alamos report LA-UR-96-3337, June 1996. ori:oai:arXiv.org:hep-lat/9609046 Proceedings of the 14th International Symposium on Lattice Field Theory, St. Louis, USA, 1996, Eds. C. Bernard, et al., Nuclear Physics (Proceedings Supplement) B53 (1997) 292294; ori:doi:10.1016/S0920-5632(96)00640-8. [inspire]. 9 citations as of Apr 13, 2011.
  74. Comparison of Inversion Algorithms for Wilson Fermions on the CM5. (R. Gupta, T. Bhattacharya, and G. Kilcup) Los Alamos report LA-UR-96-1115, May 1996. ori:oai:arXiv.org:hep-lat/9605029 (Talk presented at Workshop on Accelerating Fermion Algorithms, Jülich, February 1996) 3 citations as of Apr 13, 2011.
  75. Testing the Chiral Behaviour of the Hadron Spectrum. (T. Bhattacharya, R. Gupta, and S. Sharpe) Los Alamos report LA-UR-95-4224, December 1995. ori:oai:arXiv.org:hep-lat/9512005 Proceedings of the 13th International Symposium on Lattice Field Theory, Melbourne, Australia, 1995, Eds. T. Kieu, et al., Nuclear Physics (Proceedings Supplement) B47 (1996) 549552; ori:doi:10.1016/0920-5632(96)00119-3. [inspire]. 3 citations as of Apr 13, 2011.
  76. Status Report on Weak Matrix Element Calculations. (R. Gupta and T. Bhattacharya) Los Alamos report LA-UR-95-4223, December 1995. ori:oai:arXiv.org:hep-lat/9512006 Proceedings of the 13th International Symposium on Lattice Field Theory, Melbourne, Australia, 1995, Eds. T. Kieu, et al., Nuclear Physics (Proceedings Supplement) B47 (1996) 473480; ori:doi:10.1016/0920-5632(96)00104-1. [inspire]. 10 citations as of Apr 13, 2011.
  77. Lattice Analysis of Semi-Leptonic Form Factors. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-95-4222, December 1995. ori:oai:arXiv.org:hep-lat/9512007 Proceedings of the 13th International Symposium on Lattice Field Theory, Melbourne, Australia, 1995, Eds. T. Kieu, et al., Nuclear Physics (Proceedings Supplement) B47 (1996) 481484; ori:doi:10.1016/0920-5632(96)00105-3. [inspire]. 19 citations as of Apr 13, 2011.
  78. Phenomenology from 100 Large Lattices. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-95-72, September 1994. ori:oai:arXiv.org:hep-lat/9501016 Proceedings of the 12th International Symposium on Lattice Field Theory, Bielefeld, Germany, 1994, Eds. F. Karsch, et al., Nuclear Physics (Proceedings Supplement) B42 (1995) 935941; ori:doi:10.1016/0920-5632(95)00427-B. [inspire]. 28 citations as of Apr 13, 2011.
  79. Very Large Energy Cumulants of the 2d Potts-Model. (T. Bhattacharya, R. Lacaze, and A. Morel) Proceedings of the 12th International Symposium on Lattice Field Theory, Bielefeld, Germany, 1994, Eds. F. Karsch, et al., Nuclear Physics (Proceedings Supplement) B42 (1995) 743745; ori:doi:10.1016/0920-5632(95)00368-J. [inspire].
  80. Semileptonic form factors from lattice QCD. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-94-3079, August 1994. ori:oai:arXiv.org:hep-ph/9409284 Proceedings of 1994 Meeting of the American Physical Society, Division of Particles and Fields DPF94, Albuquerque, New Mexico, 1995, World Scientific, Ed. Sally Seidel (pages 605607). [inspire]. 3 citations as of Apr 13, 2011.
  81. A Pot-Pourri of results in QCD from Large Lattice Simulations on the CM5. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-93-4459, December 1993. ori:oai:arXiv.org:hep-lat/9312075 Proceedings of the 11th International Symposium on Lattice Field Theory, Dallas, Texas, 1993, Eds. T. Draper, et al., Nuclear Physics (Proceedings Supplement) B34 (1995) 341346; ori:doi:10.1016/0920-5632(94)90385-9. [inspire]. 1 citation as of Apr 13, 2011.
  82. The Free Energy of the Potts Model. (T. Bhattacharya, R. Lacaze, and A. Morel) Proceedings of the 11th International Symposium on Lattice Field Theory, Dallas, Texas, 1993, Eds. T. Draper, et al., Nuclear Physics (Proceedings Supplement) B34 (1994) 671673; ori:doi:10.1016/0920-5632(94)90478-2. [inspire]. 4 citations as of Apr 13, 2011.
  83. Surface Tension in QCD. (T. Bhattacharya, A. Gocksch, C.P. Korthals Altes, and R.D. Pisarski) Brookhaven Preprint BNL-45574, December 1990. Proceedings of the 8th International Symposium on Lattice Field Theory, Tallahassee, Florida, 1990, Eds. Fukugita, et al., Nuclear Physics (Proceedings Supplement) B20 (1991) 305308; ori:doi:10.1016/0920-5632(91)90931-4. [inspire]. 1 citation as of Apr 13, 2011.

Papers by Collaborations

Conference papers by the HotQCD collaboration to which I belong are usually authored by the speaker and the collaboration as a whole. I list here separately the proceedings papers which include the collaboration, but not me explicitly, as an author.

  1. On trace anomaly in 2+1 flavor QCD (P. Petreczky, for the HotQCD Collaboration) ori:oai:arXiv.org:1211.1678 [hep-lat] Proceedings of the 30th International Symposium on Lattice Field Theory, Cairns, Australia, 2012. Eds. Leinweber, et al. Proceedings of Science Lattice 2012 (2012) 069.
  2. The QCD equation of state with 2+1 flavors of Highly Improved Staggered Quarks (HISQ) (Alexei Bazavov, for the HotQCD collaboration) Proceedings of the Quark Matter 2012 International Conference, Washington DC, USA, August 1318 2012. ori:oai:arXiv.org:1210.6312 [hep-lat]
  3. Universal critical behavior and the transition temperature in (2+1)-flavor QCD (Christian Schmidt, for HotQCD) Proceedings of the IX International Conference on Quark Confinement and the Hadron Spectrum (QCHS IX), Madrid, Spain, 30 Aug3 Sep 2010. AIP Conference Proceedings 1343 (2011) 513515. ori:doi:10.1063/1.3575079
  4. The finite temperature phase transition from domain wall fermions (Michael Cheng, for the HotQCD collaboration) Proceedings of the 29th International Symposium on Lattice Field Theory, Lake Tahoe, California, USA, July 1016 2011. ori:oai:arXiv.org:1205.3526 [hep-lat] Proceedings of Science LATTICE 2011 (2012) 186.
  5. Chiral transition temperature and aspects of deconfinement in 2+1 flavor QCD with the HISQ/tree action or Determination of the transition temperature Tc in 2+1 flavor QCD: combined result with the p4, asqtad and HISQ/tree actions (Alexei Bazavov, for the HotQCD collaboration) Proceedings of the 29th International Symposium on Lattice Field Theory, Lake Tahoe, California, USA, July 1016 2011. ori:oai:arXiv.org:1201.5345 [hep-lat] Proceedings of Science LATTICE 2011 (2012) 182.
  6. Dirac Eigenvalue Spectrum at Finite Temperature Using Domain Wall Fermions (Zhongjie Lin, for the HotQCD collaboration) Proceedings of the 29th International Symposium on Lattice Field Theory, Lake Tahoe, California, USA, July 1016 2011. ori:oai:arXiv.org:1111.0988 [hep-lat] Proceedings of Science LATTICE 2011 (2012) 204.
  7. Fluctuations and Higher Moments of Conserved Charges from the Lattice (Prasad Hegde, for the HotQCD collaboration) Proceedings of the 19th Particles & Nuclei International Conference (PANIC 2011), Cambridge, Massachusetts, USA, July 2430 2011. ori:oai:arXiv.org:1110.5932 [hep-lat]
  8. Chiral Aspects of Improved Staggered Fermions with 2+1-Flavors from the HotQCD Collaboration (Wolfgang Söldner, for the HotQCD collaboration) Proceedings of the 28th International Symposium on Lattice Field Theory, Villasimius, Italy, July 1419 2010. ori:oai:arXiv.org:1012.4484 [hep-lat] Proceedings of Science LATTICE 2010 (2011) 215.
  9. The QCD equation of state and transition at finite temperature (Michael Cheng, for HotQCD) Proceedings of the 27th International Symposium on Lattice Field Theory, Beijing, China, July 2631 2009. ori:oai:arXiv.org:0912.0044 [hep-lat] Proceedings of Science LAT2009 (2010) 175.
  10. The HotQCD Equation of State (R.A. Schmidt for HotQCD Collaboration) Proceedings of the Quark Matter 2009, Knoxville, Tennessee, March 30April 4 2009. ori:oai:arXiv.org:0908.1951 [hep-lat] Nuclear Physics A830:1–4 (2009) 725c728c; ori:doi:10.1016/j.nuclphysa.2009.09.061.
  11. QCD thermodynamics at zero and non-zero density (Christian Schmidt for RBC-Bielefeld and HotQCD Collaboration) Proceedings of the Strong and Electroweak Matter, Amsterdam, the Netherlands, August 2629 2008. ori:oai:arXiv.org:0810.4024 [hep-lat]
  12. Quark Mass Dependence of the QCD Equation of State on N_tau=8 Lattices (Wolfgang Söldner for RBC-Bielefeld and HotQCD Collaboration) Proceedings of the 26th International Symposium on Lattice Field Theory, Williamsburg, Virginia, USA, July 1419 2008. ori:oai:arXiv.org:0810.2468 [hep-lat] Proceedings of Science LATTICE 2008 (2009) 173.
  13. The QCD EoS from simulations on BlueGene L Supercomputers at LLNL and NYBlue (Rajan Gupta for HotQCD Collaboration) Proceedings of the 26th International Symposium on Lattice Field Theory, Williamsburg, Virginia, USA, July 1419 2008. ori:oai:arXiv.org:0810.1764 [hep-lat] Proceedings of Science LATTICE 2008 (2009) 170.
  14. QCD Thermodynamics with Domain Wall Fermions (Michael Cheng for RBC-Bielefeld and HotQCD Collaboration) Proceedings of the 26th International Symposium on Lattice Field Theory, Williamsburg, Virginia, USA, July 1419 2008. ori:oai:arXiv.org:0810.1311 [hep-lat] Proceedings of Science LATTICE 2008 (2009) 180.
  15. Lattice QCD thermodynamic results with improved staggered fermions (Christian Schmidt for RBC-Bielefeld, HotQCD Collaboration) Proceedings of the 3rd International Conference on Hard and Electromagnetic Probes of High-Energy Nuclear Collisions Illa de Toxa, Spain, June 814 2008. ori:oai:arXiv.org:0810.0374 [hep-lat]
  16. Toward a precise determination of Tc with 2+1 flavors of quarks (Carleton DeTar and Rajan Gupta for HotQCD Collaboration) Proceedings of the 25th International Symposium on Lattice Field Theory, Regensburg, Germany, July 30August 4 2007. ori:oai:arXiv.org:0710.1655 [hep-lat] Proceedings of Science LATTICE 2007 (2008) 179.

Patents and Patent Applications

  1. Genetic signatures in envelope glycoprotein of hiv-1. (Barton F. Haynes, David C. Montefiori, Hua-Xin Liao, Feng Gao, Bette T. Korber, S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes) WO 2011126576 A3, WO 2011126576 A2; priority date: Apr 9, 2010; US Provisional Application 61/322,663 (filed Apr 9, 2010). Classification: International C12N15/49, A61K39/21, A61P31/18, C07K14/155, C07K16/10, Cooperative C12N2760/16023, C12N2740/16034, C12N7/00, C07K2317/34, A61K39/21, C07K2317/76, A61K39/00, C12N2740/16122, C12N2740/16134, C07K16/1045; European C07K16/10K1, A61K39/21, C07K14/005, C12N7/00.
  2. Acute transmitted hiv envelope signatures. (Barton F. Haynes, Bette T. Korber, Beatrice H. Hahn, Tanmoy Bhattacharya, Gnana S. Gnanakaran, Feng Gao, Ron Swanstrom, George Shaw) US 20100104596 A1, WO 2008118470 A3, WO 2008118470 A2, CA 2682206 A1, CN 101969997 A, EP 2129395 A4, EP 2129395 A2, JP 2010530356 A, AU 2008231306 A1; priority date: Mar 27, 2007; US Provisional Application 60/907,259 (filed Mar 27, 2007). Classification: US 424/208.1 International A61P37/04, A61K39/21, Cooperative A61K39/21, C12N2740/16034, C12N2740/16134, C12N2740/16122; European C07K14/005, A61K39/21.
  3. Human immunodeficiency virus type 1 clade M mosaic gag polypeptides which is a continuation of Polyvalent vaccine or Immunogenic composition comprising human immunodeficiency virus (HIV) mosaic Nef proteins or Nucleic acids encoding mosaic HIV-1 gag proteins. (Bette T. Korber, Simon Perkins, Tanmoy Bhattacharya, William M. Fischer, James Theiler, Norman Letvin, Barton F. Haynes, Beatrice H. Hahn, Karina Yusim, Carla Kuiken) US 9492532, US 9011875 B2, US 8119140 B2, US 20090324631 A1, US 20110150915 A1, US 20120231028 A1, US 20150359875 A1, WO 2007024941 A3, WO 2007024941 A2, CA 2620874 A1, CN 101969996 A, EP 1917040 A4, EP 1917040 A2, AU 2006283101 A1, AU 2006283101 B2; priority date: Aug 23, 2005; US Provisional Application 60/710,154 (filed Aug 23, 2005) and US Provisional Application 60/739.413 (filed Nov 25, 2005). Classification: US 424/188.1, 424/208.1, International A61K48/00, Cooperative A61K39/21, C12N2740/16034, A61K39/00; European A61K39/21.

Memberships and Community Services

I am a member of the American Physical Society with memberships in the Division of Computational Physics, Division of Particles and Fields, Forum on Education, Forum on Physics and Society, and the Four Corners Section.

I have served on various review committees for the National Science Foundation of the US, often for the Elementary Particle Physics Theory program. I have also refereed book manuscripts and for journals, a summary of some of my review activity for journals is available at Publons.

Honors

1999
Los Alamos Distinguished Performance Award as member of the HIV Genetics Team
2002
Los Alamos Achievement Award as member of the HIV Database Team
2015
The Duke CHAVI-ID Outstanding Contributions Award
2016
Top 1% of most cited researcher in microbiology according to Clarivarate Analytics

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Tanmoy Bhattacharya [Feb 15, 2017]